Return to main results Retrieve Phyre Job Id

Job DescriptionP28304
Confidence100.00%DateThu Jan 5 11:44:39 GMT 2012
Rank46Aligned Residues321
% Identity13%Templatec2w4qA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:prostaglandin reductase 2; PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. ....... 10... ......20...... ...30.........40.........50..... ....60.........70
Predicted Secondary structure 

..

....



..





.










.







Query SS confidence 

. .






. . . .



. .












.




























.














Query Sequence  MA. . TRIEFHK. . . . HGGP. . EVLQAVEFTPADP. AENEIQVENKAIGINFIDTYIRSGLYPPP. SLPSGLGTEAAGIVS
Query Conservation 
 ..


    .... 
 
..  
   
 
 
  .   





 
 


 

     
     .  
 
 


  
 

Alig confidence 

..






....



..












.




























.














Template Conservation 
      
   
    
 
    
 
     
      





 
 


  
     
        
   
    
 

Template Sequence  MMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGI
Template Known Secondary structure 





TTS


GGG
S


TT

TTTSS

SSTTS



BTSB
Template Predicted Secondary structure 







































Template SS confidence 















































































   0.........10.........20.........30.........40.........50.........60.........70.........
 
   71........80.........90.........100.........110.........120... ......130.........140.
Predicted Secondary structure  ..


























.......












Query SS confidence  . .




















































. . . . . . .

















Query Sequence  . . KVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL. . . . . . . KGLTVYYLLRKTYEIKPD
Query Conservation  ..  
  
     

 
                                      .......                  
Alig confidence  ..
















...
































.......

















Template Conservation     

  
     

 
  ...                   
        
                             
Template Sequence  GIIEESKHTNLTKGDFVTS. . . FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNK
Template Known Secondary structure 
STT

TT
...SBSGGG


GGGGTT
GGGGGTTTSS


TT


Template Predicted Secondary structure 










...




































Template SS confidence 















































































   80.........90........ .100.........110.........120.........130.........140.........150......
 
   142.......150.........160.........170.........180.........190.........200.........210.........220.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDT
Query Conservation              
                                                                   
Alig confidence 















































































Template Conservation   
                    
                                                         
Template Sequence  TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNI
Template Known Secondary structure  SSTTBTT
SS
TS

STTTS

TT
SS
Template Predicted Secondary structure 




































Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   222.......230.........240.. .......250.........260.........270.........280.........290......
Predicted Secondary structure 






.....




















Query SS confidence 




















. . . . .





















































Query Sequence  WERSLDCLQRRGLMVSFGNSS. . . . . GAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDV
Query Conservation             
  
      .....                                           

  
 
    
Alig confidence 




















.....



















































..
Template Conservation             
  
  
                               
             
  
  

  
 
 
..
Template Sequence  SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKI. .
Template Known Secondary structure  TT


GGGTTS


SS



TT


GGGGGGGTT
S

..
Template Predicted Secondary structure 



































..
Template SS confidence 















































































   237..240.........250.........260.........270.........280.........290.........300.........310....
 
   297..300.........310.........320......
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  AEQQKYPLKDAQRAHEILESRATQGSSLLI
Query Conservation   
     
     
   
  
   




 
Alig confidence 





























Template Conservation   
     

 
  
   
  
   




 
Template Sequence  KETVINGLENMGAAFQSMMTGGNIGKQIVC
Template Known Secondary structure 

GGGTT

SB
Template Predicted Secondary structure 








Template SS confidence 





























   315....320.........330.........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions