Job Description P28304 Confidence 100.00% Date Thu Jan 5 11:44:39 GMT 2012 Rank 55 Aligned Residues 311 % Identity 14% Template c2vwpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: haloferax mediterranei glucose dehydrogenase in complex2 with nadph and zn. Resolution 2.01 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		A	T	R	I	E	F	H	K	H	G	G	P	E	V	L	Q	A	V	E	F	T	P	A	D	P	A	E	N	E	I	Q	V	E	N	K	A	I	G	I	N	F	I	D	T	Y	I	R	S	G	L	Y	P	P	P	.	.	.	S	L	P	S	G	L	G	T	E	A	A	G	I	V	S	K	V	G	S	G	V	K	H
Query Conservation																																																								.	.	.
Alig confidence									.	.																																														.	.	.																			.	.
Template Conservation									.	.																																																																			.	.
Template Sequence		M	K	A	I	A	V	K	.	.	R	G	E	D	R	P	V	V	I	E	K	P	R	P	E	P	E	S	G	E	A	L	V	R	T	L	R	V	G	V	D	G	T	D	H	E	V	I	A	G	G	H	G	G	F	P	E	G	E	D	H	L	V	L	G	H	E	A	V	G	V	V	V	D	P	N	.	.	D	T	E
Template Known Secondary structure									.	.	T	T			S													T	T																					T		T	T	S	S		T	T		S																T	.	.	T	S	S
Template Predicted Secondary structure									.	.																																																																			.	.
Template SS confidence
		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.																																.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	A	G	D	R	V	V	Y	A	Q	S	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	S	S	V	H	N	I	I	A	D	K	A	A	I	L	P	A	A	I	S	F	E	Q	A	A	A	S	F	L	K	G	L	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	E	G	D	I	V	V	P	T	V	R	R	P	P	A	S	G	T	N	E	Y	F	E	R	D	Q	P	D	M	A	P	D	G	M	Y	F	E	R	G	I	V	G	A	H	G	Y	M	S	E	F	F	T	S	P	E	K	Y	L	V	R	I	P	R	S	Q	A	E	L	G	F	L	I	E	P	I	S	I	T	E
Template Known Secondary structure				T	T							S					T	T								T	T		G	G	G			T	T	S					T	T	B					S		B	S						G	G	G						G	G	G	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		128	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																										.	.	.	.	.
Query SS confidence										.	.	.																																										.	.	.	.	.
Query Sequence		V	Y	Y	L	L	R	K	T	.	.	.	Y	E	I	K	P	D	E	Q	F	L	F	H	A	A	A	G	G	V	G	L	I	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	G	T	A	Q	.	.	.	.	.	K	A	Q	S	A	L	K	A	G	A	W	Q	V	I	N	Y	R	E	E	D	L	V	E
Query Conservation										.	.	.																																										.	.	.	.	.
Alig confidence										.	.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		K	A	L	E	H	A	Y	A	S	R	S	A	F	D	W	D	P	S	S	A	F	V	L	G	N	G	S	L	G	L	L	T	L	A	M	L	K	V	D	D	K	G	Y	E	N	L	Y	C	L	G	R	R	D	R	P	D	P	T	I	D	I	I	E	E	L	D	A	T	Y	V	D	S	R	Q	T	P	V	E	D	V
Template Known Secondary structure											T	T	T	S													S														T	T			S										S	S										T	T						T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	K	E	I	T	G	G	K	K	V	R	V	V	Y	D	S	V	G	R	D	T	W	E	R	S	L	D	C	L	Q	R	R	G	L	M	V	S	F	G	N	S	S	G	A	V	T	G	V	N	L	G	I	L	N	Q	K	G	S	L	Y	V	T	R	P	S	L	Q	G	Y	I	T	T	R	E	E	L	T	E	A
Query Conservation
Alig confidence						.	.	.																																														.	.																						.	.
Template Conservation						.	.	.																																														.	.																						.	.
Template Sequence		P	D	V	Y	.	.	.	E	Q	M	D	F	I	Y	E	A	T	G	F	P	K	H	A	I	Q	S	V	Q	A	L	A	P	N	G	V	G	A	L	L	G	V	P	S	D	W	A	F	E	V	D	A	G	.	.	A	F	H	R	E	M	V	L	H	N	K	A	L	V	G	S	V	N	S	H	V	.	.	E	H	F
Template Known Secondary structure					T	.	.	.										S																																				.	.									T	T												.	.
Template Predicted Secondary structure						.	.	.																																														.	.																						.	.
Template SS confidence
		237	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	E	L	F	S	L	I	A	S	G	V	I	K	V	D	V	A	E	Q	Q	K	Y	P	L	K	D	A	Q	R	A	H	E	I	L	E	S	R	A	T	Q	G	S	S	L	L	I
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		E	A	A	T	V	T	F	T	K	L	P	K	W	F	L	E	D	L	V	T	G	V	H	P	L	S	E	F	E	A	A	F	D	.	.	.	D	D	D	T	T	I	K	T	A	I	E
Template Known Secondary structure											S															G	G	G	G	G	G	G	G		.	.	.		S	T	T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions