Job Description P28304 Confidence 100.00% Date Thu Jan 5 11:44:39 GMT 2012 Rank 26 Aligned Residues 320 % Identity 17% Template c2dphA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dismutase; PDBTitle: crystal structure of formaldehyde dismutase Resolution 2.27 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30							.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		A	T	R	I	E	F	H	K	H	G	G	P	E	V	L	Q	A	V	E	F	T	P	A	D	P	A	E	N	E	.	.	.	.	.	.	I	Q	V	E	N	K	A	I	G	I	N	F	I	D	T	Y	I	R	S	G	L	Y	P	P	P	S	L	P	S	G	L	G	T	E	A	A	G	I	V	S	K	V	G	S	G
Query Conservation																															.	.	.	.	.	.
Alig confidence									.	.	.																				.	.	.	.	.	.																									.
Template Conservation									.	.	.																																																		.
Template Sequence		N	K	S	V	V	Y	H	.	.	.	G	T	R	D	L	R	V	E	T	V	P	Y	P	K	L	E	H	N	N	R	K	L	E	H	A	V	I	L	K	V	V	S	T	N	I	C	G	S	D	Q	H	I	Y	R	G	R	F	I	V	.	P	K	G	H	V	L	G	H	E	I	T	G	E	V	V	E	K	G	S	D
Template Known Secondary structure									.	.	.		T	T												S			T	T				T	T																				T	T	S	S			.		T	T		B														T	T
Template Predicted Secondary structure									.	.	.																																																		.
Template SS confidence
		3	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																																						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		V	K	H	I	K	A	G	D	R	V	V	Y	A	Q	S	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	Y	S	S	V	H	N	I	I	A	D	K	A	A	I	L	P	A	A	I	S	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		V	E	L	M	D	I	G	D	L	V	S	V	P	F	N	V	A	C	G	R	C	R	N	C	K	E	A	R	S	D	V	C	E	N	N	L	V	N	P	D	A	D	L	G	A	F	G	F	D	L	K	G	W	S	G	G	Q	A	E	Y	V	L	V	P	Y	A	D	Y	M	L	L	K	F	G	D	K	E	Q	A	M
Template Known Secondary structure				S			T	T							S	B				S		S					T	T		G	G	G				T	T	T		S	S	S	S			B	T	T	T	T	B	S	S				S	S	B	S					S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
				115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	F	E	Q	A	A	A	S	F	L	K	G	L	T	V	Y	Y	L	L	R	K	T	Y	E	I	K	P	D	E	Q	F	L	F	H	A	A	A	G	G	V	G	L	I	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	G	T	A	Q	K	A	Q	S	A	L	K	A	G	A	W	Q	V	I	N	Y
Query Conservation		.	.
Alig confidence		.	.																						.
Template Conservation																									.
Template Sequence		E	K	I	K	D	L	T	L	I	S	D	I	L	P	T	G	F	H	G	C	V	S	A	.	G	V	K	P	G	S	H	V	Y	I	A	G	A	G	P	V	G	R	C	A	A	A	G	A	R	L	L	G	A	A	C	V	I	V	G	D	Q	N	P	E	R	L	K	L	L	S	D	A	G	F	E	T	I	D	L	R
Template Known Secondary structure			T					T	T	T	T	T												T	.	T			T	T									S														T		S							S										T	T	T						T	T
Template Predicted Secondary structure																									.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	E	D	L	V	E	R	L	K	E	I	T	G	G	K	K	V	R	V	V	Y	D	S	V	G	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	W	E	R	S	L	D	C	L	Q	R	R	G	L	M	V	S	F	G	N	S	S	G	A	V	T	G	V	N	L	G	I	L	N	Q	K	G
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	A	P	L	R	D	Q	I	D	Q	I	L	G	K	P	E	V	D	C	G	V	D	A	V	G	F	E	A	H	G	L	G	D	E	A	N	T	E	T	P	N	G	A	L	N	S	L	F	D	V	V	R	A	G	G	A	I	G	I	P	G	I	Y	V	G	S	D	P	D	P	V	N	K	D	A	G	S	G	R
Template Known Secondary structure		S	S	S											S	S	S									S		T	T		B		S	G	G	G	T	T	S	B		T	T																				S				S			S	S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																.	.
Query SS confidence										.	.	.																																.	.
Query Sequence		S	L	Y	V	T	R	P	S	.	.	.	L	Q	G	Y	I	T	T	R	E	E	L	T	E	A	S	N	E	L	F	S	L	I	A	S	G	V	I	K	V	D	V	.	.	A	E	Q	Q	K	Y	P	L	K	D	A	Q	R	A	H	E	I	L	E	S	R	A	T	Q	G	S	S	L	L	I	P
Query Conservation										.	.	.																																.	.
Alig confidence										.	.	.																																.	.																							.
Template Conservation																																																																				.
Template Sequence		L	H	L	D	F	G	K	M	W	T	K	S	I	R	I	M	T	G	M	A	P	V	T	N	Y	N	R	H	L	T	E	A	I	L	W	D	Q	M	P	Y	L	S	K	V	M	N	I	E	V	I	T	L	D	Q	A	P	D	G	Y	A	K	F	D	K	G	S	.	P	A	K	F	V	I	D	P
Template Known Secondary structure												T	T						S	S			G	G	G	T										T	T																S	T	T										T	T		.	S							T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions