Job Description P28304 Confidence 100.00% Date Thu Jan 5 11:44:39 GMT 2012 Rank 36 Aligned Residues 307 % Identity 16% Template c2cf5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cinnamyl alcohol dehydrogenase; PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5 Resolution 2.0 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	R	I	E	F	H	K	H	G	G	P	E	V	L	Q	A	V	E	F	T	P	A	D	P	A	E	N	E	I	Q	V	E	N	K	A	I	G	I	N	F	I	D	T	Y	I	R	S	G	L	Y	P	P	P	S	L	P	S	G	L	G	T	E	A	A	G	I	V	S	K	V	G	S	G	V	K	H	I	K	A
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		T	T	G	W	A	A	R	D	P	S	G	I	.	.	L	S	P	Y	T	Y	T	L	R	E	T	G	P	E	D	V	N	I	R	I	I	C	C	G	I	C	H	T	D	L	H	Q	T	K	N	D	L	G	M	S	N	Y	P	M	V	P	G	H	E	V	V	G	E	V	V	E	V	G	S	D	V	S	K	F	T	V
Template Known Secondary structure									S	T	T			.	.													T	T																				T		T	T	T				S	S	B															S	S			S			T
Template Predicted Secondary structure														.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.																																			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	R	V	V	Y	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	L	G	A	Y	S	S	V	H	N	I	I	A	D	K	A	A	I	L	P	A	A	I	S	F	E	Q	A	A	A	S	F	L	K	G	L	T
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	I	V	G	V	G	C	L	V	G	C	C	G	G	C	S	P	C	E	R	D	L	E	Q	Y	C	P	K	K	I	W	S	Y	N	D	V	Y	I	N	G	Q	P	T	Q	G	G	F	A	K	A	T	V	V	H	Q	K	F	V	V	K	I	P	E	G	M	A	V	E	Q	A	A	P	L	L	C	A	G	V	T
Template Known Secondary structure		T							S						S	S	S					T	T		G	G	G		T	T				T	T	T	S	B		T	T	S		B				S	S	B	S						G	G	G						S	S							T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	Y	L	L	R	K	T	Y	E	I	K	P	D	E	Q	F	L	F	H	A	A	A	G	G	V	G	L	I	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	G	T	A	Q	K	A	Q	S	A	L	K	A	G	A	W	Q	V	I	N	Y	R	E	E	D	L	V	E	R	L	K	E	I	T	G	G
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		V	Y	S	P	L	S	H	F	G	L	K	Q	P	G	L	R	G	G	I	L	G	L	G	G	V	G	H	M	G	V	K	I	A	K	A	M	G	H	H	V	T	V	I	S	S	S	N	K	K	R	E	E	A	L	Q	D	L	G	A	D	D	Y	V	I	G	S	D	Q	A	K	M	S	E	L	A	D	.	.	.	.
Template Known Secondary structure									T	S	T	T	S	T	T									S														T								S	S	T	T							T	T	S			S					T	T								S	T	T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	V	R	V	V	Y	D	S	V	G	R	D	T	W	E	R	S	L	D	C	L	Q	R	R	G	L	M	V	S	F	G	N	S	S	G	A	V	T	G	V	N	L	G	I	L	N	Q	K	G	S	L	Y	V	T	R	P	S	L	Q	G	Y	I	T	T	R	E	E	L	T	E	A	S	N	E	L	F	S	L	I
Query Conservation
Alig confidence																																	.																													.	.	.	.	.	.	.	.	.
Template Conservation																																	.																													.	.	.	.	.	.	.	.	.
Template Sequence		S	L	D	Y	V	I	D	T	V	P	V	H	H	A	L	E	P	Y	L	S	L	L	K	L	D	G	K	L	I	L	M	.	G	V	I	N	N	P	L	Q	F	L	T	P	L	L	M	L	G	R	K	V	I	T	G	S	F	I	G	S	.	.	.	.	.	.	.	.	.	M	K	E	T	E	E	M	L	E	F	C
Template Known Secondary structure		T										S				S					T	T											.	S			S	S													T								S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.										.	.	.	.	.	.	.	310	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	V	I	K	V	D	V	A	E	Q	Q	K	Y	P	L	K	D	A	Q	R	A	H	E	I	L	E	S	R	A	T	Q	G	S	S	L	L	I	P
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		K	E	K	G	L	S	S	.	.	.	I	I	E	V	V	K	M	D	Y	V	N	T	A	F	E	R	L	E	K	N	D	V	R	Y	R	F	V	V	D	V
Template Known Secondary structure				T	T				.	.	.							G	G	G										T	T		S	S	S						T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		314	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions