Job Description P28304 Confidence 100.00% Date Thu Jan 5 11:44:39 GMT 2012 Rank 28 Aligned Residues 309 % Identity 19% Template c1h2bA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of the alcohol dehydrogenase from the2 hyperthermophilic archaeon aeropyrum pernix at 1.65a3 resolution Resolution 1.62 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																													.	.	.
Query SS confidence																									.																													.	.	.
Query Sequence		T	R	I	E	F	H	K	H	G	G	P	E	V	L	Q	A	V	E	F	T	P	A	D	.	P	A	E	N	E	I	Q	V	E	N	K	A	I	G	I	N	F	I	D	T	Y	I	R	S	G	L	Y	P	.	.	.	P	P	S	L	P	S	G	L	G	T	E	A	A	G	I	V	S	K	V	G	S	G	V	K	H
Query Conservation																									.																													.	.	.
Alig confidence													.	.											.																													.	.	.
Template Conservation													.	.
Template Sequence		K	A	A	R	L	H	E	Y	N	K	P	.	.	L	R	I	E	D	V	D	Y	P	R	L	E	G	R	F	D	V	I	V	R	I	A	G	A	G	V	C	H	T	D	L	H	L	V	Q	G	M	W	H	E	L	L	Q	P	K	L	P	Y	T	L	G	H	E	N	V	G	Y	I	E	E	V	A	E	G	V	E	G
Template Known Secondary structure							S	S	T	T	S		.	.												B	T	T	B																					T	T	T								S	S																T	T			S
Template Predicted Secondary structure													.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		I	K	A	G	D	R	V	V	Y	A	Q	S	A	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	S	V	H	N	I	I	A	D	K	A	A	I	L	P	A	A	I	S	F	E	Q	.	.	.	.	A	A	A	S	F	L	K	G	L	T	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		L	E	K	G	D	P	V	I	L	H	P	A	V	T	D	G	T	C	L	A	C	R	A	G	E	D	M	H	C	E	N	L	E	F	P	G	L	N	I	D	G	G	F	A	E	F	M	R	T	S	H	R	S	V	I	K	L	P	K	D	I	S	R	E	K	L	V	E	M	A	P	L	A	D	A	G	I	T	A	Y
Template Known Secondary structure				T	T							S		B			S		S					T	T		G	G	G		T	T		B		B	T	T	T	B			S	S	B	S						G	G	G						T	T									T	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	L	L	R	K	T	Y	E	I	K	P	D	E	Q	F	L	F	H	A	A	A	G	G	V	G	L	I	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	G	T	A	Q	K	A	Q	S	A	L	K	A	G	A	W	Q	V	I	N	Y	R	E	E	D	L	V	E	R	L	K	E	I	T	G	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	V	K	K	A	A	R	T	L	Y	P	G	A	Y	V	A	I	V	G	V	G	G	L	G	H	I	A	V	Q	L	L	K	V	M	T	P	A	T	V	I	A	L	D	V	K	E	E	K	L	K	L	A	E	R	L	G	A	D	H	V	V	D	A	R	R	D	P	V	K	Q	V	M	E	L	T	R	G	R	G
Template Known Secondary structure									T	T			T	T									S																							S	S										T	T		S					T	T	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	R	V	V	Y	D	S	V	G	R	D	T	W	E	R	S	L	D	C	L	Q	R	R	G	L	M	V	S	F	G	N	S	S	G	A	V	T	G	V	N	L	G	I	L	N	Q	K	G	S	L	Y	V	T	R	P	S	L	Q	G	Y	I	T	T	R	E	E	L	T	E	A	S	N	E	L	F	S	L	I	A
Query Conservation
Alig confidence																																					.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		V	N	V	A	M	D	F	V	G	S	Q	A	T	V	D	Y	T	P	Y	L	L	G	R	M	G	R	L	I	I	V	G	Y	G	G	E	.	.	L	R	F	P	T	I	R	V	I	S	S	E	V	S	F	E	G	S	L	V	G	N	.	.	.	.	.	.	.	.	.	Y	V	E	L	H	E	L	V	T	L	A	L
Template Known Secondary structure								S	S									G	G	G	G													S	S		.	.											T	T								S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.										.	.	.	.	.	.	.	.	320	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	I	K	V	D	V	A	E	Q	Q	K	Y	P	L	K	D	A	Q	R	A	H	E	I	L	E	S	R	A	T	Q	G	S	S	L	L	I	P
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		Q	G	K	V	R	V	.	.	.	E	V	D	I	H	K	L	D	E	I	N	D	V	L	E	R	L	E	K	G	E	V	L	G	R	A	V	L	I	P
Template Known Secondary structure		T	T	S				.	.	.							G	G	G										T	T			S	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		324	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions