Job Description P0ACG1 Confidence 27.18% Date Thu Jan 5 11:18:06 GMT 2012 Rank 12 Aligned Residues 75 % Identity 9% Template c3ivpD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630. Resolution 2.02 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	V	M	L	Q	S	L	N	N	I	R	T	L	R	A	M	A	R	E	F	S	I	D	V	L	E	E	M	L	E	K	F	R	V	V	T	K	E	R	R	E	E	E	E	Q	Q	Q	R	E	L	A	E	R	Q	E	K	I	S	T	W	L	E	L	M	K	A	D	G	I	N	P	E	E	L	L	G	N	S	S
Query Conservation
Alig confidence																			.																						.	.	.	.	.	.	.	.	.
Template Conservation																			.																						.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	D	F	R	A	L	G	L	A	I	K	E	A	R	K	K	.	Q	G	L	T	R	E	Q	V	G	A	X	I	E	I	D	P	R	Y	L	T	N	.	.	.	.	.	.	.	.	.	I	E	N	K	G	Q	H	P	S	L	Q	V	L	Y	D	L	V	S	L	L	N	V	S	V	D	E	F	F	L	P	A	S
Template Known Secondary structure																			.	T	T											T	S								.	.	.	.	.	.	.	.	.				S																	T			S					S		T	T
Template Predicted Secondary structure																			.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	V	K	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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