Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG59
Confidence5.41%DateThu Jan 5 11:28:11 GMT 2012
Rank34Aligned Residues22
% Identity14%Templated1k6ya1
SCOP infoDNA/RNA-binding 3-helical bundle N-terminal Zn binding domain of HIV integrase N-terminal Zn binding domain of HIV integrase
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.
Predicted Secondary structure 








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Query Sequence  PHGFLRKFGLSRIKVREAAMRG
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Template Sequence  WRAMASDFNLPPVVAKEIVASC
Template Known Secondary structure  T


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   1920.........30.........40
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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