Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG59
Confidence9.86%DateThu Jan 5 11:28:11 GMT 2012
Rank18Aligned Residues22
% Identity27%Templatec2xzm8_
PDB info PDB header:ribosomeChain: 8: PDB Molecule:rps25e,; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100
Predicted Secondary structure 










Query SS confidence 





















Query Sequence  LSRIKVREAAMRGEIPGLKKAS
Query Conservation 



  
 

  
 



 


Alig confidence 





















Template Conservation 



 

 
   



 

  
Template Sequence  LARQLMRTMADRKLVEKVAKNG
Template Known Secondary structure  TTST
Template Predicted Secondary structure 





Template SS confidence 





















   7980.........90.........100
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions