Job Description P64429 Confidence 51.64% Date Thu Jan 5 12:08:15 GMT 2012 Rank 91 Aligned Residues 88 % Identity 16% Template c2xdtA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the soluble domain of human2 endoplasmic reticulum aminopeptidase 1 erap1 Resolution 2.70 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	P	N	E	D	E	A	A	K	F	T	S	V	I	L	A	T	T	E	D	T	W	G	Q	Q	F	E	K	M	G	K	T	Y	Q	Q	P	K	L	V	M	Y	R	G	M	T	R	T	G	C	G	A	G	Q	S	I	M	G	P	F	Y	C	P	A	D	G	T	V	Y	I	D	L	S	F	Y	D	D	M	K	D
Query Conservation
Alig confidence																													.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	P	D	K	I	N	Q	A	D	Y	A	L	D	A	A	V	T	L	L	E	F	Y	E	D	Y	F	.	.	.	S	I	P	Y	P	L	P	K	Q	D	L	A	A	I	P	D	F	Q	S	G	A	M	E	N	W	G	L	.	.	.	.	.	.	.	.	.	.	T	T	Y	R	E	S	A	L	L	F	D	A	E
Template Known Secondary structure				T	T	T	G	G	G																			T	.	.	.	T					S	S								S	S		S	S	S					T	T		.	.	.	.	.	.	.	.	.	.					G	G	G	T				T	T
Template Predicted Secondary structure																													.	.	.																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.											.	.	.	.	.	330	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	A	D	G	D	F	A	Q	G	Y	V	I	A	H	E	V	G	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	S	A	S	S	K	L	G	I	T	M	T	V	A	H	E	L	A	H	Q
Template Known Secondary structure		T																			T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions