 |
Job Description | P0A6T5 | Confidence | 9.13% | Date | Thu Jan 5 11:03:53 GMT 2012 |
Rank | 50 | Aligned Residues | 59 |
% Identity | 15% | Template | c3us8A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:isocitrate dehydrogenase [nadp]; |
PDBTitle: crystal structure of an isocitrate dehydrogenase from sinorhizobium2 meliloti 1021
|
Resolution | 2.25 Å |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | R | P | P | V | H | E | M | D | N | E | T | . |
. |
. |
. |
. |
. |
. |
. |
R | K | S | L | I | A | G | H | M | T | E | I | M | Q | L | L | N | L | D | L | A | D | D | S | L | M | E | T | P | H | R | I | A | K | M | Y | V | D | E | I | F | S | G | L | D | Y |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|
|   |
|
|   |
|
|
|
|
|   |   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|
|   |   |
|
|
|   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|
Template Sequence |   |
A | A | H | G | T | V | T | R | H | Y | R | Q | H | Q | K | G | E | E | T | S | T | N | S | I | A | S | I | F | A | W | T | R | G | L | A | H | R | A | K | L | D | G | N | A | E | L | A | K | F | S | E | T | L | E | R | V | C | V | D | T | V | E | S | G | F | X | T |
Template Known Secondary structure |   |
|
| S |
|
|
|  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|