Job Description Q46889 Confidence 100.00% Date Thu Jan 5 12:35:31 GMT 2012 Rank 2 Aligned Residues 380 % Identity 54% Template d1yzya1 SCOP info YgbK-like YgbK-like YgbK-like Resolution 2.10

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	V	I	A	D	D	F	T	G	A	T	D	I	A	S	F	L	V	E	N	G	L	P	T	V	Q	I	N	G	V	P	T	G	K	M	P	E	A	I	D	A	L	V	I	S	L	K	T	R	S	C	P	V	V	E	A	T	Q	Q	S	L	A	A	L	S	W	L	Q	Q	Q	G	C	K	Q	I	Y	F	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	V	I	A	D	D	F	T	G	A	S	D	I	A	S	F	L	V	E	N	G	L	S	T	V	Q	M	N	G	V	P	T	Q	S	L	N	S	K	V	D	A	I	V	I	S	L	K	S	R	S	N	P	V	N	E	A	I	E	Q	S	L	R	A	Y	Q	W	L	K	E	N	G	C	T	Q	F	Y	F	K	Y
Template Known Secondary structure							S	S													T	T	T								S			S	S				S			S									S	S	S																			T	T			S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	T	F	D	S	T	A	K	G	N	I	G	P	V	T	D	A	L	M	D	A	L	D	T	P	F	T	V	F	S	P	A	L	P	V	N	G	R	T	V	Y	Q	G	Y	L	F	V	M	N	Q	L	L	A	E	S	G	M	R	H	H	P	V	N	P	M	T	D	S	Y	L	P	R	L	V	E	A	Q	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	S	T	F	D	S	T	A	K	G	N	I	G	P	V	T	D	A	L	L	D	E	L	N	E	D	F	T	V	I	T	P	A	L	P	V	N	G	R	T	I	F	N	G	Y	L	F	V	G	D	V	L	L	S	E	S	G	M	K	N	H	P	I	T	P	M	V	D	A	N	L	M	R	L	M	D	A	Q	A	K
Template Known Secondary structure			T	T					T	T		T													T										B	G	G	G	T					T	T					T	T			G	G	G	S	G	G	G	G		S	S	S						B										S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	C	G	V	V	S	A	H	V	F	E	Q	G	V	D	A	V	R	Q	E	L	A	R	L	Q	Q	E	G	Y	R	Y	A	V	L	D	A	L	T	E	H	H	L	E	I	Q	G	E	A	L	R	D	A	P	L	V	T	G	G	S	G	L	A	I	G	L	A	R	Q	W	A	Q	E	N	G	N	Q	A	R	K
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		G	K	T	G	L	V	A	Y	A	D	V	I	K	G	A	S	R	V	Q	E	C	F	A	E	L	K	A	Q	G	Y	R	Y	A	V	V	D	A	V	D	N	S	Q	L	E	V	L	A	E	A	V	A	D	F	K	L	V	T	G	G	S	G	L	G	A	Y	M	A	A	R	L	S	G	G	K	K	G	T	N	.	.
Template Known Secondary structure		S											T	T															T	T		S						B	S	S	T										T	T	T		S					S													T	S			G	G	G	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	P	L	A	G	R	G	V	V	L	S	G	S	C	S	Q	M	T	N	R	Q	V	A	H	Y	R	Q	I	A	P	A	R	E	V	D	V	A	R	C	L	S	I	E	T	L	A	A	Y	A	H	E	L	A	E	W	V	L	G	Q	E	S	V	L	A	P	L	V	F	A	T	A	S	T	D	A	L	A	A
Query Conservation
Alig confidence																																												.	.
Template Conservation																																												.	.
Template Sequence		A	F	T	P	T	K	G	K	T	V	V	L	S	G	S	C	S	V	M	T	N	K	Q	V	E	K	Y	R	E	K	A	P	H	F	Q	L	D	V	E	Q	A	I	.	.	H	N	E	N	Y	I	E	Q	L	Y	Q	W	V	I	A	N	L	D	S	E	F	A	P	M	V	Y	A	T	V	P	P	D	A	L	K	A
Template Known Secondary structure							S											S											T	T	T	S												.	.			T	T											T	T	T	T	S	S	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	Q	Q	Y	G	A	Q	K	A	S	Q	A	V	E	T	L	F	S	Q	L	A	A	R	L	A	A	E	G	V	T	R	F	I	V	A	G	G	E	T	S	G	V	V	T	Q	S	L	G	I	K	G	F	H	I	G	P	T	I	S	P	A	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	H	Q	F	G	V	D	Q	A	S	H	A	I	E	N	T	F	A	K	L	A	A	K	L	K	Q	Y	G	V	T	N	F	I	T	A	G	G	E	T	S	S	I	V	V	Q	E	L	G	F	T	G	F	H	I	G	K	Q	I	A	P	G	V	P
Template Known Secondary structure				T	T	T																								T								S												T												T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions