Job Description Q46889 Confidence 36.89% Date Thu Jan 5 12:35:31 GMT 2012 Rank 81 Aligned Residues 104 % Identity 15% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40													.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	I	G	V	I	A	D	D	F	.	.	T	G	A	T	D	I	A	S	F	L	V	E	N	G	L	P	T	V	Q	I	N	G	V	P	T	G	K	M	P	.	.	.	.	.	.	.	.	.	.	.	.	E	A	I	D	A	L	V	I	S	L	K	T	R	S	C	P	V	V	E	A	T	Q	Q	S	L	A	A
Query Conservation												.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.														.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	.	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I
Template Known Secondary structure											T	T															.	T	T							S	T	T																		T		S								S	S			S	S	S
Template Predicted Secondary structure																											.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	W	L	Q	Q	Q	G	C	K	Q	I	Y	F	K	Y	C	S	T	F	D	S	T	A	K	G	N	I	G	P	V	T	D	A	L	M	D	A	L	D	T	P	F	T	V	F
Query Conservation
Alig confidence						.	.	.									.	.	.	.
Template Conservation						.	.	.									.	.	.	.
Template Sequence		A	R	V	T	.	.	.	K	P	N	L	V	I	F	V	.	.	.	.	G	D	A	L	A	G	N	A	I	V	E	Q	A	R	Q	F	N	E	A	V	K	I	D	G	I	I	L
Template Known Secondary structure						.	.	.			S						.	.	.	.			T	T		T	T	T												S
Template Predicted Secondary structure						.	.	.									.	.	.	.
Template SS confidence
		231	.	.	.				.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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