Return to main results Retrieve Phyre Job Id

Job DescriptionQ46889
Confidence44.08%DateThu Jan 5 12:35:31 GMT 2012
Rank56Aligned Residues66
% Identity14%Templatec2j289_
PDB info PDB header:ribosomeChain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs
Resolution8.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110...
Predicted Secondary structure 



























Query SS confidence 








































































Query Sequence  EAIDALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVF
Query Conservation     




 
 

 
   

   
      
         


 











 

 
          

Alig confidence 






























...







....


























Template Conservation     









   
  
  

  
    ... 
 
 


....


  

     
  
       



Template Sequence  KFYDVLLVDTAGRLHVDEAMMDEIKQVHASI. . . NPVETLFV. . . . VDAMTGQDAANTAKAFNEALPLTGVVL
Template Known Secondary structure  TT
S




SS...

S....TTTGGGGTT
SS
Template Predicted Secondary structure 












...


....








Template SS confidence 








































































   182.......190.........200.........210.. .......220 .........230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions