Job Description Q46889 Confidence 44.08% Date Thu Jan 5 12:35:31 GMT 2012 Rank 56 Aligned Residues 66 % Identity 14% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	I	D	A	L	V	I	S	L	K	T	R	S	C	P	V	V	E	A	T	Q	Q	S	L	A	A	L	S	W	L	Q	Q	Q	G	C	K	Q	I	Y	F	K	Y	C	S	T	F	D	S	T	A	K	G	N	I	G	P	V	T	D	A	L	M	D	A	L	D	T	P	F	T	V	F
Query Conservation
Alig confidence																																	.	.	.									.	.	.	.
Template Conservation																																	.	.	.									.	.	.	.
Template Sequence		K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	.	.	.	N	P	V	E	T	L	F	V	.	.	.	.	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	V	L
Template Known Secondary structure		T	T		S											S	S																.	.	.			S						.	.	.	.			T	T	T	G	G	G	G									T	T		S	S
Template Predicted Secondary structure																																	.	.	.									.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions