Return to main results Retrieve Phyre Job Id

Job DescriptionQ46889
Confidence55.71%DateThu Jan 5 12:35:31 GMT 2012
Rank38Aligned Residues107
% Identity16%Templatec2cnwF_
PDB info PDB header:signal recognitionChain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30........ .40.........50......... 60....
Predicted Secondary structure 



..









............












...
Query SS confidence 









. .


























. . . . . . . . . . . .




















. . .




Query Sequence  IKIGVIADDF. . TGATDIASFLVENGLPTVQINGVPTGK. . . . . . . . . . . . MPEAIDALVISLKTRSCPVVE. . . ATQQS
Query Conservation   

 





..


 


  
   
  
          ............     




 
 

 
   
...
   
Alig confidence 









..












.












............




















...




Template Conservation    
 

  
  
  
  

   
  .  
                           
 







         

  
Template Sequence  KKVMFCAGDTFRAAGGTQLSEWGKR. LSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKV
Template Known Secondary structure 





SSTT.T




TTS
TT
S





TT
Template Predicted Secondary structure 





.



















Template SS confidence 















































































   131........140.........150..... ....160.........170.........180.........190.........200.........
 
   65....70.........80.........90.........100.........110...
Predicted Secondary structure 
















Query SS confidence 
















































Query Sequence  LAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVF
Query Conservation        
         


 











 

 
          

Alig confidence 

















....


























Template Conservation             
    

....



                    

 
Template Sequence  KRAIAKADPEEPKEVWLV. . . . LDAVTGQNGLEQAKKFHEAVGLTGVIV
Template Known Secondary structure 
TT


....TT

T

S
Template Predicted Secondary structure 






....








Template SS confidence 
















































   210.........220....... ..230.........240.........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions