Job Description P76097 Confidence 24.88% Date Thu Jan 5 12:18:52 GMT 2012 Rank 56 Aligned Residues 147 % Identity 25% Template c3nzpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:arginine decarboxylase; PDBTitle: crystal structure of the biosynthetic arginine decarboxylase spea from2 campylobacter jejuni, northeast structural genomics consortium target3 br53 Resolution 3.00 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.											.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.															.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	N	E	T	Q	A	Q	E	F	V	Q	E	A	L	E	T	F	R	W	H	.	.	.	.	.	.	.	.	.	.	Q	S	A	T	V	D	E	E	T	Y	R	A	L	H	N	E	H	R	L	I	A	D	V	V	C	F	P	G	C	H	I	N	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Query Conservation																							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	S	T	E	L	I	E	A	V	N	L	L	K	E	N	K	L	L	E	Q	F	T	X	I	H	F	H	L	G	S	Q	I	T	E	I	H	P	L	K	K	A	L	N	E	A	G	N	I	Y	T	E	L	R	K	X	G	A	K	N	L	K	A	I	N	L	G	G	G	L	A	V	E	Y	S	Q	F	K	N
Template Known Secondary structure		S	B															T	T		T	T	T										S		B			S																				T	T		T	T								S		B							S	S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		227	.	.	230	.											.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.															.
Query SS confidence							.	.	.	.	.	.	.	.	.	.															.
Query Sequence		P	R	T	L	D	.	.	.	.	.	.	.	.	.	.	I	D	R	V	Q	S	M	M	P	E	C	G	I	E	.	P	K	I	L	I	E	G	P	P	R	R	E	V	P	I	L	L	R	Q	T	S	F	K	A	L	E	E	T	V	L	F	A	G	Q	K	Q	G	T	H	T	A	R	F	G	E	I	E	Q	R	G
Query Conservation							.	.	.	.	.	.	.	.	.	.															.
Alig confidence							.	.	.	.	.	.	.	.	.	.															.							.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	S	R	N	Y	T	L	R	E	Y	A	N	D	V	V	F	I	L	K	N	I	A	E	Q	K	K	D	L	E	P	D	I	F	I	E	.	.	S	G	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	A	N	H	A	V	L	I	A	P	V	L	E	L	F	S	Q	E
Template Known Secondary structure				S		S	S																				T	T										.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																																						.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.																				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		296	.	.	.	300	.										.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	L	T	P	K	.	.	.	.	.	.	.	.	.	G	R	Q	L	Y	D	D	L	L	R	N	A	G	T	G	Q	D	N	L	T	H	Q	M	H	L	Q	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	E	N	K	L	I	L	K	K	Q	N	P	K	L	I	D	E	L	Y	D	L	Y	K	S	I	K	P	S	N	A	L	E	Y	L	H	D	S	I	D	H	L	E	S	I	L	T	L	F	D	L	G	Y	V	D	L	Q	D	R	S	N	A	E	I	L	T	H	L	I	T	K	K	A	I	L	L	L	G	E	V
Template Known Secondary structure				G	G	G	S				S	S																	T	T	T																				T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
												330	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	F	R	T	F	P	D	S	E	F
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	R	Y	L	V	N	F	S	L	F	Q	S	X	P	D	F	W	G
Template Known Secondary structure		S	B					S	S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions