Job Description P76097 Confidence 100.00% Date Thu Jan 5 12:18:52 GMT 2012 Rank 3 Aligned Residues 237 % Identity 27% Template c3lhoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of putative hydrolase (yp_751971.1) from shewanella2 frigidimarina ncimb 400 at 1.80 a resolution Resolution 1.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	S	Q	A	M	S	A	M	Y	Q	Q	E	V	P	Q	Y	G	T	L	L	E	L	V	A	D	V	N	L	A	V	L	E	N	N	P	Q	L	H	E	K	M	V	N	A	D	E	L	A	R	L	N	V	E	R	H	G	A	I	R	V	G	T	A	Q	E	L	A	T	L	R	R	M	F	A	I	M	G	M	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		A	L	F	A	A	L	W	Q	D	Y	I	K	X	T	P	S	A	A	K	I	H	Q	L	L	G	H	.	.	.	.	.	.	.	.	.	.	.	G	A	P	I	I	N	D	H	I	A	L	R	T	F	N	I	A	K	.	.	.	.	.	.	.	.	.	V	N	L	S	V	L	A	K	H	F	T	S	I	G	Y	V
Template Known Secondary structure																											T	.	.	.	.	.	.	.	.	.	.	.	T	S													S		G	G	.	.	.	.	.	.	.	.	.	G											T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.												.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	Y	Y	D	L	S	Q	A	G	V	P	V	H	S	T	A	F	R	P	I	D	D	A	S	L	A	R	N	P	F	R	V	F	T	S	L	L	R	L	E	L	I	E	N	E	I	L	R	Q	K	A	A	E	I	L	R	Q	R	D	I	F	T	P	R	C	R	Q	L	L	E	E	Y	E	Q	Q	G	G	F
Query Conservation
Alig confidence													.	.														.	.	.	.		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.														.	.	.	.		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	G	D	Y	K	F	E	Q	K	K	.	.	L	I	A	K	H	F	E	H	P	D	P	K	Q	.	.	.	.	P	.	K	V	F	I	S	E	L	L	V	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	P	E	V	Q	K	S	I	H	G	L	I	D	Q	V	D	I
Template Known Secondary structure									T	T	T	T	.	.									S	S	T	T	S	.	.	.	.		.									G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													T	T	S		G
Template Predicted Secondary structure													.	.														.	.	.	.		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90					.		.	.	.	.	.	.	.	.	100	.	.																				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		N	E	T	Q	A	Q	E	F	V	Q	E	A	L	E	T	F	R	W	H	Q	S	A	T	V	D	E	E	T	Y	R	A	L	H	N	E	H	R	L	I	A	D	V	V	C	F	P	G	C	H	I	N	H	L	T	.	.	.	.	.	.	P	R	T	L	D	I	D	R	V	Q	S	M	M	P	E	C	G	I	E	P
Query Conservation																																																								.	.	.	.	.	.
Alig confidence											.	.	.								.	.	.	.																							.									.	.	.	.	.	.
Template Conservation											.	.	.								.	.	.	.																							.
Template Sequence		A	A	T	T	A	D	N	F	I	.	.	.	Y	S	G	R	H	W	D	.	.	.	.	V	D	K	A	T	Y	Q	A	L	L	A	E	S	E	Y	A	A	W	V	A	A	L	.	G	Y	R	A	N	H	F	T	V	S	I	N	D	L	P	E	F	E	R	I	E	D	V	N	Q	A	L	K	Q	A	G	F	V	L
Template Known Secondary structure		G	G	G	G	S	T	T	G	G	.	.	.	G		B			S		.	.	.	.																							.		B	S		S						T	T	T		T	T														T	T			B
Template Predicted Secondary structure											.	.	.								.	.	.	.																							.
Template SS confidence
		121	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		247	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		K	I	.	.	.	L	I	E	G	P	P	R	R	E	V	P	I	L	L	R	Q	T	S	F	K	A	L	E	E	T	V	L	F	A	G	Q	K	Q	G	T	H	T	A	R	F	G	E	I	E	Q	R	G	V	A	L	T	P	K	G	R	Q	L	Y	D	D	L	L	R
Query Conservation				.	.	.
Alig confidence				.	.	.								.	.	.	.																								.												.	.	.
Template Conservation														.	.	.	.																								.												.	.	.
Template Sequence		N	S	S	G	G	E	V	K	G	S	P	E	.	.	.	.	V	L	L	E	Q	S	S	T	X	A	D	K	V	V	V	N	F	T	D	G	D	V	E	.	I	P	S	C	F	Y	E	F	A	R	R	.	.	.	Y	P	X	A	N	G	Q	L	Y	T	G	F	V	A
Template Known Secondary structure				T	T		S	S				G	G	.	.	.	.	G	T						B										T	T					.												.	.	.		B		T	T	S	S	B				S	S
Template Predicted Secondary structure														.	.	.	.																								.												.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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