Return to main results Retrieve Phyre Job Id

Job DescriptionP37651
Confidence15.76%DateThu Jan 5 11:56:23 GMT 2012
Rank31Aligned Residues24
% Identity29%Templated2nefa_
SCOP infoRegulatory factor Nef Regulatory factor Nef Regulatory factor Nef
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240..
Predicted Secondary structure 























Query SS confidence 



























Query Sequence  KGFSPDWVRYEKDKGWQLKAEKTLISSY
Query Conservation 


 


   
                
Alig confidence 















....







Template Conservation 

 

 

 

 



....


  


Template Sequence  QGYFPDWQNYTPGPGI. . . . RYPLTFGW
Template Known Secondary structure  T


SSS

B
SSSSS....B
BSSSS
Template Predicted Secondary structure 












....






Template SS confidence 



























   118.120.........130... ......140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions