 |
Job Description | P37651 | Confidence | 3.72% | Date | Thu Jan 5 11:56:23 GMT 2012 |
Rank | 93 | Aligned Residues | 83 |
% Identity | 18% | Template | d1wwxa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ets domain
|
Resolution | UNK |
|
 |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | L | D | W | T | Q | N | N | L | A | Q | G | S | L | K | E | R | L | P | A | W | L | W | G | K | K | E | N | S | K | W | E | V | L | D | S | N | S | A | S | D | G | D | V | W | M | A | W | S | L | L | E | A | G | R | L | W | K | E | Q | . |
. |
. |
. |
. |
. |
R | Y | T | D | I | G | S | A | L | L | K | R | I |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |   |
|
|   |   | . | . | . | . | . | . |   |
|   |   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |   | . | . |   |   |   |
|   |
|
|
|
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
H | L | W | E | F | V | R | D | L | L | L | S | P | E | E | N | C | G | I | L | E | W | E | D | . |
. |
R | E | Q | G | I | F | R | V | V | K | S | E | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | K | M | W | G | Q | R | K | K | N | D | R | M | T | Y | E | K | L | S | R | A | L | R | Y | Y | Y |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|
| S |
|
|  |  |  |  | . | . | T | T | T | T |  |  |  |
| S |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
|
. | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | E | E | V | V | T | V | P | G | L | G | S | M | . |
. |
L | L | P | G | K | V | G | F | A | E | D | N |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |   |   |   | . | . |
|
|
|
|   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|
| . |
|   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
K | T | G | I | L | E | R | V | . |
D | R | R | L | V | Y | K | F | G | K | N | A | H | G | W | Q | E | D | K |
Template Known Secondary structure |   |
 |  | T | S |  |  |
|
| . | S | S | S | S |  |  |  |  |
| S | S |
|
| S | S |
|
| S |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|