Job Description P37651 Confidence 17.36% Date Thu Jan 5 11:56:23 GMT 2012 Rank 27 Aligned Residues 23 % Identity 30% Template c3rbbA_ PDB info PDB header:viral protein, protein binding Chain: A: PDB Molecule:protein nef; PDBTitle: hiv-1 nef protein in complex with engineered hck sh3 domain Resolution 2.35 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	S	P	D	W	V	R	Y	E	K	D	K	G	W	Q	L	K	A	E	K	T	L	I	S	S	Y
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		G	Y	F	P	D	W	Q	N	Y	T	P	G	P	G	I	.	.	.	.	R	Y	P	L	T	F	G	W
Template Known Secondary structure			B		S					B			S	S	S		.	.	.	.	B		B	S	S	T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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