Return to main results Retrieve Phyre Job Id

Job DescriptionP37651
Confidence90.18%DateThu Jan 5 11:56:23 GMT 2012
Rank11Aligned Residues243
% Identity11%Templatec3pmmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative cytoplasmic protein; PDBTitle: the crystal structure of a possible member of gh105 family from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60....... ..70.........80.........90.........100.........110.....
Predicted Secondary structure 









..




























Query SS confidence 





























. .















































Query Sequence  QEGRVIDPSDARKITTSEGQSYGMFSALAA. . NDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSAS
Query Conservation    




       
 








 

  .. 
   

 

 


  
   
    
 

 
         
 
 
 

Alig confidence 





























..




















.......................



Template Conservation          
    



 

   

   
  


 

 
    
 
       .......................   
Template Sequence  DDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQTGDIEXRDIIDRWFADRFAEGA. . . . . . . . . . . . . . . . . . . . . . . TTKN
Template Known Secondary structure  TTS

SSSTTS
S



.......................



Template Predicted Secondary structure 





















.......................



Template SS confidence 















































































   50.........60.........70.........80.........90.........100.. ....
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  DGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFG
Query Conservation 



 

 


 
   

   
   
  

  
    
    
    



  

        



  
     

   
Alig confidence 





















































...






















Template Conservation 

    
  
  

  



 
  

    
 
    


  
   
       ...  




 



 



  
   
Template Sequence  VNTXAPFLTLAYRFEETGRXAYLPWLESWAEWAXHEXPRTEQGGXQHXTLAEEN. . . HQQXWDDTLXXTVLPLAKIGKLL
Template Known Secondary structure  TTTTTT

GGGTS
B
GGG
B



SS


...TTTTTT
Template Predicted Secondary structure 


























...




Template SS confidence 















































































   107..110.........120.........130.........140.........150.........160 .........170.........180...
 
   196. ..200.........210.. .......220.........230.........240....... ..250.........260.....
Predicted Secondary structure 

.....


























.....





Query SS confidence 

. . .














. .


































. . . . .

















Query Sequence  AP. . . WTTLRETNQRLLLET. . APKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRV. . . . . YMWVGMMPDSDPQKARML
Query Conservation    ...
  
   
  

   ..  


 


   
                


 

..... 

 
            
Alig confidence 

...














..

















....












.....

















Template Conservation      
 
 
  
       
 
  


  
  
       ....    
 




   

   
    

     
  
 
Template Sequence  NRPQYVEEATYQFLLHVQNLXDRETGLWFHGWNYEGRHNF. . . . ARARWARGNSWLTXVIPDFLELVDLPEGNAVRRYLI
Template Known Secondary structure  T
B
TTTS
B
STTTTB
T....T


B


TT
Template Predicted Secondary structure 
















....












Template SS confidence 















































































   184.....190.........200.........210.........220... ......230.........240.........250.........
 
   266...270.........280... ......290.... .....300.........310
Predicted Secondary structure 




.







...




Query SS confidence 

















.










. . .















Query Sequence  NRFKPMATFTEKNGYPPE. KVDVATGKAQG. . . KGPVGFSAAMLPFLQN
Query Conservation    
             
 . 

  

    ...    
  

       
Alig confidence 

















.










...















Template Conservation           
   

 



 





 

 











  

  
Template Sequence  TVLDAQIAALAECQDDSGLWHTLLDDPHSYLEASATAGFAYGILKAVRK
Template Known Secondary structure 

TTS
SBTT
TTS
T
Template Predicted Secondary structure 
















Template SS confidence 
















































   260.........270.........280.........290.........300........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions