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| Job Description | P37651 | | Confidence | 12.59% | Date | Thu Jan 5 11:56:23 GMT 2012 |
| Rank | 37 | Aligned Residues | 24 |
| % Identity | 25% | Template | c3ik5A_ |
| PDB info |
PDB header:viral protein/signaling protein | Chain: A: PDB Molecule:protein nef; |
PDBTitle: sivmac239 nef in complex with tcr zeta itam 1 polypeptide2 (a63-r80)
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| Resolution | 2.05 Å |
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215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
| Predicted Secondary structure | |
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| Query Sequence | |
K | G | F | S | P | D | W | V | R | Y | E | K | D | K | G | W | Q | L | K | A | E | K | T | L | I | S | S | Y |
| Query Conservation | |
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| Template Conservation | |
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| Template Sequence | |
E | G | I | I | P | D | W | Q | D | Y | T | S | G | P | G | I | . |
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R | Y | P | K | T | F | G | W |
| Template Known Secondary structure | |
T |
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| S | S | S | . | . | . | . | B |
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| Template Predicted Secondary structure | |
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| Template SS confidence | |
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150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
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. | . | . | . | 170 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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