Return to main results Retrieve Phyre Job Id

Job DescriptionP37651
Confidence69.71%DateThu Jan 5 11:56:23 GMT 2012
Rank15Aligned Residues90
% Identity14%Templatec3eu8D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative glucoamylase; PDBTitle: crystal structure of putative glucoamylase (yp_210071.1) from2 bacteroides fragilis nctc 9343 at 2.12 a resolution
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   199200.........210.... .....220.........230.........240.........250....... ..260.........270.
Predicted Secondary structure 

..





























.....
Query SS confidence 















. .










































. . . . .













Query Sequence  TTLRETNQRLLLETAP. . KGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDS. . . . . DPQKARMLNRFKPM
Query Conservation    
   
  

     ..


 


   
                


 

 

 
     .....       
  
   
Alig confidence 















..










....



























.....













Template Conservation    
 
 

 

        

 


    ....  
    
  






  
 
   
 
 
 
   
   
   

 
Template Sequence  DTVQRRTFNYFWDAAEPNSGLARERYHXD. . . . GEYPAGGPEIVTSGGSGFGIXAILAGIDRGYVSREEGLRRXEKIVGF
Template Known Secondary structure  SS
TTT


BSTT....


TTS
TTTTSS
Template Predicted Secondary structure 














....
















Template SS confidence 















































































   44.....50.........60.........70.. .......80.........90.........100.........110.........
 
   272...... .280.........290..
Predicted Secondary structure 
.









Query SS confidence 






.













Query Sequence  ATFTEKN. GYPPEKVDVATGKA
Query Conservation         .   
  

  

  
Alig confidence 






.













Template Conservation 
  
    
   




 

  
Template Sequence  LEKADRFKGAYPHWWNGETGHV
Template Known Secondary structure  S

BTTB

STTT

B
Template Predicted Secondary structure 
















Template SS confidence 





















   120.........130.........140.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions