Job Description P37651 Confidence 6.12% Date Thu Jan 5 11:56:23 GMT 2012 Rank 54 Aligned Residues 176 % Identity 20% Template c1lf6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glucoamylase; PDBTitle: crystal structure of bacterial glucoamylase Resolution 2.10 Å

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		124	.	.	.	.	.	130				.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	E	A	G	R	.	.	.	L	W	K	E	Q	.	.	.	.	R	Y	T	D	I	G	S	A	L	L	K	R	I	A	R	E	E	V	V	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	L	G	S	M	L	L	P	G	K	V	G	F	A	E	D	N	S	W	R	F	N
Query Conservation									.	.	.						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.						.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	C	A	A	Y	I	A	E	Q	N	K	D	Y	E	S	A	Q	K	Y	Q	E	K	A	D	N	W	Q	K	L	I	D	N	L	T	Y	T	E	N	G	P	L	G	N	G	Q	Y	Y	I	R	I	A	G	L	S	D	P	D	A	D	F	M	I	N	I	A	N	G	G	G	V	Y	D	Q	K	E	I	V	D
Template Known Secondary structure													T	T																										S	S		S	S	T	T	S					S		B	S	S	S		T	T	S							T	T	T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.									.	.	.	.	.	.	250	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		P	S	Y	L	P	P	T	L	A	Q	Y	F	T	R	F	G	A	P	W	T	T	L	R	E	T	N	Q	R	L	L	L	E	T	A	P	K	G	F	S	P	D	W	V	R	Y	E	K	D	K	G	W	Q	L	K	A	E	K	T	L	I	S	S	Y	D	.	.	.	.	.	.	.	.	A	I	R	V	Y	M	W	V
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence																																							.	.																										.	.	.	.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		P	S	F	L	E	L	V	R	L	G	V	K	S	A	D	D	P	K	I	L	N	T	L	K	V	V	D	S	T	I	K	V	D	T	P	K	G	.	.	P	S	W	Y	R	Y	N	H	D	G	Y	G	E	P	S	K	T	E	L	Y	H	G	A	G	K	G	R	L	W	P	L	L	T	G	E	R	G	M	Y	E	I
Template Known Secondary structure		G	G	G	G					T	T	S	S		T	T															S					T	T		.	.					S	S	T	T				S		S	B	T	T	B			S	S	S	S				B	B
Template Predicted Secondary structure																																							.	.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570			.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		G	M	M	P	D	S	D	P	Q	K	A	R	M	L	N	R	F	K	P	M	A	T	F	T	E	K	N	G	Y	P	P	E	K	V	D	V	A	T	G	K	A	Q	G	K	.	G	P	V	G	F	S	A	A	M	L	P	F	L
Query Conservation																																														.
Alig confidence								.	.	.	.	.	.	.																																.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		A	A	G	K	D	A	.	.	.	.	.	.	.	T	P	Y	V	K	A	M	E	K	F	A	N	E	G	G	I	I	S	E	Q	V	W	E	D	T	G	L	P	T	D	S	A	S	P	L	N	W	A	H	A	E	Y	V	I	L
Template Known Secondary structure			T	T				.	.	.	.	.	.	.											S		T	T	S				S		B		T	T	T			B		S	S		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		612	.	.	.	.	.								.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions