Job Description P33222 Confidence 100.00% Date Thu Jan 5 11:51:22 GMT 2012 Rank 4 Aligned Residues 350 % Identity 11% Template c3n6xA_ PDB info PDB header:ligase Chain: A: PDB Molecule:putative glutathionylspermidine synthase; PDBTitle: crystal structure of a putative glutathionylspermidine synthase2 (mfla_0391) from methylobacillus flagellatus kt at 2.35 a resolution Resolution 2.35 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		L	D	Q	I	A	A	D	N	G	F	D	F	H	I	I	D	N	E	I	Y	W	D	E	S	R	A	Y	R	F	T	L	R	Q	I	E	E	Q	I	E	K	P	T	A	E	L	H	Q	M	C	L	E	V	V	D	R	A	V	K	D	E	E	I	L	T	Q	L	A	I	P	P	L	Y	W	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		A	E	L	L	F	R	R	V	G	I	T	F	L	.	.	.	.	.	.	.	I	P	F	D	V	V	P	R	I	L	S	A	S	E	W	A	R	L	S	D	G	A	I	Q	R	V	K	A	L	N	X	F	L	H	D	V	Y	H	D	Q	E	I	I	K	A	G	I	V	P	S	S	I	L	A	N	A	Q	Y	R	P
Template Known Secondary structure															.	.	.	.	.	.	.			B		S	S																															T	T	T						T	T	S	S		G	G	G	G	G		T	T			G
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		D	V	I	A	E	S	W	R	A	R	D	P	S	L	Y	G	R	M	D	F	A	W	C	G	N	A	P	V	K	L	L	E	Y	N	A	D	T	P	T	S	L	.	.	.	Y	E	S	A	Y	F	Q	W	L	W	L	E	D	A	R	R	S	G	I	I	P	R	D	A	D	Q	Y	N	A	I	Q	E	R	L	I	S
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		E	X	F	G	V	D	V	P	G	G	V	Y	A	H	I	A	G	V	D	L	V	R	T	G	E	N	D	F	Y	V	L	E	D	N	L	R	T	P	S	G	V	S	Y	X	L	E	N	R	K	X	X	X	R	L	F	P	E	L	F	R	R	Y	P	V	A	P	V	E	H	Y	P	Q	V	L	L	N	N	L	R	A
Template Known Secondary structure		G	G	T	T				G	G	G		S		S										S	S	S										S	S																									S		B				T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.																.	.
Query SS confidence																																																															.	.																.	.
Query Sequence		R	F	S	E	L	Y	S	R	E	P	F	Y	F	C	C	C	Q	D	T	D	E	D	R	S	T	V	L	Y	L	Q	D	C	A	Q	Q	A	G	Q	E	S	R	F	I	Y	I	E	D	L	G	L	G	V	G	G	V	L	T	D	L	D	D	.	.	N	V	I	Q	R	A	F	K	L	Y	P	L	E	W	M	.	.
Query Conservation																																																															.	.																.	.
Alig confidence																																			.	.	.	.	.																								.	.																.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		V	A	Q	A	G	V	H	E	P	T	V	V	L	L	T	P	G	A	Y	N	S	A	Y	F	E	H	A	F	I	A	Q	Q	X	.	.	.	.	.	G	I	E	L	V	E	G	Q	D	L	F	V	R	N	N	A	V	Y	X	R	T	T	E	G	P	K	R	V	D	V	I	Y	R	R	I	D	D	D	F	I	D	P
Template Known Secondary structure		T	S		T	T		S	S										S	S	S	T	T												.	.	.	.	.	T						G	G	G					S	S							T	T												S		G	G	G	S		T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
											238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.					290	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																					.	.	.											.	.	.							.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																					.	.	.											.	.	.							.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	R	D	D	N	G	P	L	L	R	K	R	R	E	Q	W	V	E	P	L	W	K	S	I	L	S	N	K	G	L	M	P	L	L	W	R	.	.	.	F	F	P	G	H	P	N	L	L	A	.	.	.	S	W	F	D	G	E	.	.	.	.	K	P	Q	I	A	A	G	E	S
Query Conservation		.	.	.	.	.	.	.	.	.																																					.	.	.											.	.	.							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																					.	.	.											.	.	.							.	.	.	.
Template Conservation
Template Sequence		L	S	F	R	P	D	S	X	L	G	V	P	G	L	L	S	V	Y	R	N	G	G	V	T	L	A	N	A	V	G	T	G	V	A	D	D	K	D	T	Y	I	Y	V	P	E	X	I	R	F	Y	L	G	E	E	P	I	L	S	N	V	P	T	Y	Q	L	S	K	A	D	D	L	K	Y	V	L	D	N	L	A	E
Template Known Secondary structure		T	T	S		T	T		S	S	S		T	T							T	T	S					S		T	T	T					S	T	T	T	G	G	G											S			S	S								T	T	S										S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.									.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.
Predicted Secondary structure																																.	.	.																	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																																.	.	.																	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		Y	V	R	K	P	I	Y	S	R	E	G	G	N	V	T	I	F	D	G	K	N	N	V	V	D	H	A	D	G	D	.	.	.	Y	A	D	E	P	M	I	Y	Q	A	F	Q	P	L	P	R	.	.	.	.	.	.	.	.	F	G	D	S	Y	T	L	I	G	S	W	I	V	D	D	E	A	C	.	.	.	.	G
Query Conservation																																.	.	.																	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence										.	.	.	.	.																		.	.	.																	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		L	V	V	K	E	V	Q	G	.	.	.	.	.	X	L	V	G	P	A	A	S	K	Q	E	L	E	D	F	R	Q	R	I	L	A	N	P	A	N	Y	I	A	Q	P	T	L	A	L	S	T	C	P	T	L	V	E	T	G	I	A	P	R	H	V	D	L	R	P	F	V	L	S	G	K	T	V	S	L	V	P	G
Template Known Secondary structure										.	.	.	.	.				G	G	G																S	G	G	G																	T	T																S	S	S					S
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370	.						.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.				.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		M	G	I	R	E	D	N	T	L	.	.	.	I	T	K	D	T	S
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		A	L	C	R	V	A	L	R	E	G	S	L	V	V	N	S	S	Q
Template Known Secondary structure									S	T	T					S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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