Return to main results Retrieve Phyre Job Id

Job DescriptionP33222
Confidence99.54%DateThu Jan 5 11:51:22 GMT 2012
Rank7Aligned Residues311
% Identity14%Templatec3kalB_
PDB info PDB header:ligaseChain: B: PDB Molecule:homoglutathione synthetase; PDBTitle: structure of homoglutathione synthetase from glycine max in2 closed conformation with homoglutathione, adp, a sulfate3 ion, and three magnesium ions bound
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90........ .100.........110 .........
Predicted Secondary structure 












.



.


Query SS confidence 
























































.











.








Query Sequence  LRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSL. YGRMDFAWCGNA. PVKLLEYNA
Query Conservation         
  

 

      
         

  



      
  
        .  


      
.  



 

Alig confidence 



































...

















.











.








Template Conservation   
   
 
   

 
  

   
    
 
 

  
...  
   
      
   


 






      



 

Template Sequence  LAPIFNELVDRVSLDGKFLQESLSRTKNADEFTSRL. . . LDIHSKMLQINKKEDIRMGIVRSDYMIDEKTKSLLQIEMNT
Template Known Secondary structure  T
T
...TT







TTTT
Template Predicted Secondary structure 




...













Template SS confidence 















































































   96...100.........110.........120.........130. ........140.........150.........160.........170..
 
   120........ .130.........140.........150.........160.........170.........180.........190..
Predicted Secondary structure 


.......






















Query SS confidence 








. . . . . . .































































Query Sequence  DTPTSLYES. . . . . . . AYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQD
Query Conservation 


 
  

.......                              
            
         

     

  
Alig confidence 








.......































































Template Conservation 

 


 

  
  

  

              
 
 
   

  

 
   
    
 

 


  
 
  


 

 
Template Sequence  ISTSFALIGCLMTGLHKSLLSQYGKFLGLNSNRVPANNAVDQSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISA
Template Known Secondary structure  SS


GGGTT

GGGS



T
TT

SS
TT
Template Predicted Secondary structure 



























Template SS confidence 















































































   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   193. .....200......... 210.........220.........230. ........240..... ....250.........260..
Predicted Secondary structure  .




....









..




...




Query SS confidence 

.














. . . .





















. .













. . .
















Query Sequence  CA. QQAGQESRFIYIEDL. . . . GLGVGGVLTDLDDNVIQRAFKL. . YPLEWMMRDDNGPL. . . LRKRREQWVEPLWKSIL
Query Conservation    .   
         

....     
   
  
  

 
 
 .. 
 
 
       
...     
  


    
 
Alig confidence 

.














....








.











..













...
















Template Conservation   
   
 
   
 

 

     
     
 .  
 










 
 

 
   
 


 

 
 






  


Template Sequence  LLREKHHIRSIRKTLTEIDQEGKILPDGTLS. VDGQAISVVYFRAGYTPKDYPSESEWRARLLMEQSSAIKCPTISYHLV
Template Known Secondary structure  TT




TTS
.TTS
SSGGG
SSSSSS
Template Predicted Secondary structure 











.
















Template SS confidence 















































































   253......260.........270.........280... ......290.........300.........310.........320.........330.
 
   263......270.........280.........290 .........300.........310.........320
Predicted Secondary structure 











......................
















Query SS confidence 



























. . . . . . . . . . . . . . . . . . . . . .





























Query Sequence  SNKGLMPLLWRFFPGHPNLLASWFDGEK. . . . . . . . . . . . . . . . . . . . . . PQIAAGESYVRKPIYSREGGNVTIFDGKNN
Query Conservation   








 
   
  

      
 ......................         
 

  

 
 

 
      
Alig confidence 










.....











......................





















.....


Template Conservation 






 

 .....
 





        

  

  
 

       
   
  













.....

 
Template Sequence  GTKKIQQELAK. . . . . PGVLERFVENKDHIAKLRACFAGLWSLEDSDIVKKAIENPELFVMKPQREGGGNNI. . . . . YGD
Template Known Secondary structure  TSS.....TTT





TT

GGG
S

SSS

B.....
Template Predicted Secondary structure 



.....





















.....

Template SS confidence 















































































   332.......340.. .......350.........360.........370.........380.........390........ .400.
 
   321........330.........340.........350 .........360 .......
Predicted Secondary structure 












...............

......
Query SS confidence 





























. . . . . . . . . . . . . . .









. . . . . .






Query Sequence  VVDHADGDYADEPMIYQAFQPLPRFGDSYT. . . . . . . . . . . . . . . LIGSWIVDDE. . . . . . ACGMGIR
Query Conservation                
 

 
  
       ............... 

 
 
 
 ...... 

   
Alig confidence 







.




















...............









......






Template Conservation 

   
  .
  




 

 
       

 
       







  
     
  
   




Template Sequence  ELRETLLK. EDAAYILMQRIFPATSPAILVRDGNWDTGHVISEAGIFGTYLRNKDKIIINNESGYMVR
Template Known Secondary structure 
.

TT






TTSSS
Template Predicted Secondary structure  .






























Template SS confidence 



































































   402....... 410.........420.........430.........440.........450.........460........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions