 |
Job Description | P33222 | Confidence | 42.59% | Date | Thu Jan 5 11:51:22 GMT 2012 |
Rank | 85 | Aligned Residues | 82 |
% Identity | 15% | Template | c3k1tA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:glutamate--cysteine ligase gsha; |
PDBTitle: crystal structure of putative gamma-glutamylcysteine synthetase2 (yp_546622.1) from methylobacillus flagellatus kt at 1.90 a3 resolution
|
Resolution | 1.90 Å |
|
 |
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | |
|
|
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | K | P | I | Y | S | R | E | G | G | N | V | T | I | F | D | G | K | N | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | D | H | A | D | G | D | Y | A | D | E | P | M | I | Y | Q | A | F | Q | P | L | P | R | F | G | D | S | Y | . |
. |
. |
T | L | I | G | S | W | I | V | D | D | E | A | C | G | M | G | I |
Query Conservation |   |
|   |
|
|   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   | . | . | . |   |   |
|
|   |
|   |
|   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|
|
|   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|
|
|
|
| . | . |
|
|
|   |   |   |   |
|
|
|
|
|
Template Sequence |   |
I | V | K | A | D | A | G | T | Y | G | X | G | I | X | T | V | K | S | A | D | D | V | R | D | L | N | R | K | Q | R | N | K | X | S | V | V | K | E | G | L | K | V | S | E | V | I | L | Q | E | G | V | Y | T | F | E | H | L | K | D | A | V | A | E | P | V | I | . |
. |
Y | X | X | D | H | F | V | V | G | G | F | Y |
Template Known Secondary structure |   |
 |  |  |  |  |
| G | G | G |
|  |  |  |  |  |  | S | S | G | G | G | G | S | S |
|
|  |  |  |  |  |  |  |  |
| S | S | S | S | S |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  | T | T |  |  |  |  |  |  |  | . | . |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
|
. | . | . | . | 350 | . | . | . | . | . | . | . |
  |
  |   |
367 | . | . | 370 | . | . | |
. | . | . | . | |
|
|
|
. | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
| . |
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
R | E | D | N | T | L | . |
I | T | K | D | . |
. |
. |
. |
T | S | R | F | V | P | H |
Query Conservation |   |
|   |   |   |   |   | . |
|
|   |   | . | . | . | . |   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|
Template Sequence |   |
R | V | H | T | S | R | G | A | D | E | N | L | N | A | P | G | X | H | F | E | P | L |
Template Known Secondary structure |   |
 |  |  | S |
|
| S | T | T | T | T | T | S |
|
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
358 | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|