 |
Job Description | P33222 | Confidence | 92.29% | Date | Thu Jan 5 11:51:22 GMT 2012 |
Rank | 46 | Aligned Residues | 124 |
% Identity | 10% | Template | c3g8cB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:biotin carboxylase; |
PDBTitle: crystal stucture of biotin carboxylase in complex with2 biotin, bicarbonate, adp and mg ion
|
Resolution | 2.00 Å |
|
 |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  | . | . |  |  |  |  |
|
|
|  |  | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | N | G | P | L | L | R | K | R | R | E | Q | W | V | E | P | L | W | K | . |
. |
S | I | L | S | N | K | G | L | M | . |
P | L | L | W | R | F | F | P | G | H | P | N | L | L | A | S | W | F | D | G | E | . |
. |
. |
. |
. |
K | P | Q | I | A | A | G | E | S | Y | V | R | K | P | I | Y | S | R | E | G | G | N | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |   |   | . | . |   |
|   |   |
|
|
|
|
| . |
|
|
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|   |
|
|   |
|
|
Template Sequence |   |
N | F | A | E | Q | V | E | R | S | G | F | I | F | I | G | P | K | A | E | T | I | R | L | M | G | D | K | V | S | A | I | A | A | M | K | K | A | G | V | P | C | V | P | G | S | D | G | P | L | G | D | D | M | D | K | N | R | A | I | A | K | R | I | G | Y | P | V | I | I | K | A | S | G | G | G | G | G | R | G | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|  |  | S | S | S |
|  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| B |
|
| B |
| S | S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  | S | S |
|
| S | S |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
313 | . | . | . | . | . | . | 320 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | |
. | 360 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | F | D | G | K | N | N | V | V | D | . |
. |
. |
. |
. |
. |
. |
H | A | D | G | D | Y | A | D | E | P | M | I | Y | Q | A | F | Q | P | L | P | R | F | G | D | S | Y | T | L | I | G | S | W | I | V | D | . |
D | E | A | C | G | M | G | I | R | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   | . |
|   |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | V | V | R | G | D | A | E | L | A | Q | S | I | S | M | T | R | A | E | A | K | A | A | F | S | N | D | M | V | Y | M | E | K | Y | L | E | N | P | R | H | . |
. |
. |
. |
V | E | I | Q | V | L | A | D | G | Q | G | N | A | I | Y | L | A | E | R | D |
Template Known Secondary structure |   |
 |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |
|
| S | S |
|  |  | . | . | . | . |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|