Job Description P33222 Confidence 100.00% Date Thu Jan 5 11:51:22 GMT 2012 Rank 1 Aligned Residues 341 % Identity 27% Template c2ioaA_ PDB info PDB header:ligase, hydrolase Chain: A: PDB Molecule:bifunctional glutathionylspermidine PDBTitle: e. coli bifunctional glutathionylspermidine2 synthetase/amidase incomplex with mg2+ and adp and3 phosphinate inhibitor Resolution 2.80 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		D	E	S	R	A	Y	R	F	T	L	R	Q	I	E	E	Q	I	E	K	P	T	A	E	L	H	Q	M	C	L	E	V	V	D	R	A	V	K	D	E	E	I	L	T	Q	L	A	I	P	P	L	Y	W	D	V	I	A	E	S	W	R	A	R	D	P	.	S	L	Y	G	R	M	D	F	A	W	C	G	N	A	P
Query Conservation																																																																		.
Alig confidence															.																																																			.															.
Template Conservation															.																																																																		.
Template Sequence		D	P	Y	H	Y	Y	T	I	T	E	S	A	E	.	Q	E	L	I	K	A	T	N	E	L	H	L	M	Y	L	H	A	T	D	K	V	L	K	D	D	N	L	L	A	L	F	D	I	P	K	I	L	W	P	R	L	R	L	S	W	Q	R	R	R	H	H	M	I	T	G	R	M	D	F	C	M	D	E	R	G	.
Template Known Secondary structure			T	T											.																							T						G	G	G				G	G	G												T	T													T	T		.
Template Predicted Secondary structure															.																																																																		.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	L	L	E	Y	N	A	D	T	P	T	S	L	Y	E	S	A	Y	F	Q	W	L	W	L	E	D	A	R	R	S	G	I	I	P	R	D	A	D	Q	Y	N	A	I	Q	E	R	L	I	S	R	F	S	E	L	Y	S	R	E	P	F	Y	F	C	C	C	Q	D	T	D	E	D	R	S	T	V	L	Y	L	Q
Query Conservation
Alig confidence																																	.	.	.	.																															.
Template Conservation																																	.	.	.	.																															.
Template Sequence		L	K	V	Y	E	Y	N	A	D	S	A	S	C	H	T	E	A	G	L	I	L	E	R	W	A	E	Q	G	Y	K	G	.	.	.	.	N	G	F	N	P	A	E	G	L	I	N	E	L	A	G	A	W	K	H	S	R	A	R	P	F	V	H	I	M	Q	.	D	K	D	I	E	E	N	Y	H	A	Q	F	M	E
Template Known Secondary structure										S	S									T												S	.	.	.	.	S		B		T	T	T	T											T	S				S							.		S
Template Predicted Secondary structure																																	.	.	.	.																															.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																				.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	C	A	Q	Q	A	G	Q	E	S	R	F	I	Y	I	E	D	L	G	L	G	V	G	G	V	L	T	D	L	D	D	N	V	I	Q	R	A	F	K	L	Y	P	L	E	W	M	M	R	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	P	L	L	R	K	R	R	E	Q
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.
Template Sequence		Q	A	L	H	Q	A	G	F	E	T	R	I	L	R	G	L	D	.	.	.	E	L	G	W	Q	L	I	D	G	E	G	R	L	V	N	C	V	W	K	T	W	A	W	E	T	A	F	D	Q	I	R	E	V	F	A	A	V	P	I	R	T	G	H	P	Q	N	E	V	R	L	I	D	V	L	L	R	P	E	V	L
Template Known Secondary structure							T	T								S	S	T	.	.	.	T		B				B		T	T	S		B								S															S					S			T	T					S					T	S	T	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.				.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	E	P	L	W	K	S	I	L	S	N	K	G	L	M	P	L	L	W	R	F	F	P	G	H	P	N	L	L	A	S	W	F	D	G	E	K	P	Q	I	A	A	G	E	S	Y	V	R	K	P	I	Y	S	R	E	G	G	N	V	T	I	F	D	G	K	N	N	V	V	D	H	A	D	G	D	Y	A	D	E
Query Conservation
Alig confidence																																														.	.
Template Conservation																																														.	.
Template Sequence		V	F	E	P	L	W	T	V	I	P	G	N	K	A	I	L	P	I	L	W	S	L	F	P	H	H	R	Y	L	L	D	T	D	F	T	V	N	D	E	L	V	K	T	G	.	.	Y	A	V	K	P	I	A	G	R	C	G	S	N	I	D	L	V	S	H	H	E	E	V	L	D	K	T	S	G	K	F	A	E	Q
Template Known Secondary structure				S		G	G	G	G	T	T	T	S	G	G	G								S	T	T		T	T						S	S										.	.						T	T			T	T		S						T	T	S									T	T	T	T	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.			530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	I	Y	Q	A	F	Q	P	L	P	R	F	G	D	S	Y	T	L	I	G	S	W	I	V	D	D	E	A	C	G	M	G	I	R	E	D	N	T	L	I	T	K	D	T	S	R	F	V	P	H	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	I	Y	Q	Q	L	W	C	L	P	K	V	D	G	K	Y	I	Q	V	C	T	F	T	V	G	G	N	Y	G	G	T	C	L	R	G	D	E	S	L	V	I	K	K	E	S	D	I	E	P	L	I	V
Template Known Secondary structure															T	T											T	T											S	S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions