Job Description P77610 Confidence 3.20% Date Thu Jan 5 12:31:02 GMT 2012 Rank 56 Aligned Residues 122 % Identity 11% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.				.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		Y	A	G	I	L	A	T	L	V	V	Y	V	V	G	V	F	L	N	Y	L	V	P	S	R	V	F	E	I	V	L	N	F	A	S	L	G	I	I	A	S	W	A	F	I	I	V	C	Q	M	R	L	R	K	A	I	K	E	G	K	A	A	D	V	S	F	.	.	.	K	L	P	G	A	P	F	T	S	W	L	T
Query Conservation																																																																			.	.	.
Alig confidence																																																																			.	.	.
Template Conservation
Template Sequence		V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L
Template Known Secondary structure		G	G	G																T	T			B																														T	T	S	S				T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		901	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.												.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	F	L	L	S	V	L	V	L	M	A	F	D	Y	P	N	G	T	Y	T	I	A	A	L	P	I	I	G	I	L	L	V	I	.	.	.	.	.	.	.	.	.	.	.	G	W	F	G	V	R	K	R	V	A	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R	R	F	S	R	K
Template Known Secondary structure												T	T		S	S	S																				T	T	T	T	S	S	S	S	S	S								T	S
Template Predicted Secondary structure
Template SS confidence
		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions