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Job DescriptionP77610
Confidence9.69%DateThu Jan 5 12:31:02 GMT 2012
Rank15Aligned Residues153
% Identity5%Templatec3o7pA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:l-fucose-proton symporter; PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   347..350.........360.........370.........380.........390.........400.........410.........420......
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Query Sequence  SRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTS
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Template Sequence  KKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFASFG
Template Known Secondary structure  S
TTT
SS
GGG
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   427..430.........440.........450.........460.........470.........480.........490.........
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Query Sequence  WLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS
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Template Conservation            
                                                              
Template Sequence  AIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN
Template Known Secondary structure  TTSSSS



S
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   166...170.........180.........190.........200.........210.........220.........230........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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