Return to main results Retrieve Phyre Job Id

Job DescriptionP77610
Confidence4.78%DateThu Jan 5 12:31:02 GMT 2012
Rank34Aligned Residues32
% Identity9%Templatec2rddB_
PDB info PDB header:membrane protein/transport proteinChain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   453......460.........470.........480....
Predicted Secondary structure 









Query SS confidence 































Query Sequence  ALPIIGILLVIGWFGVRKRVAEIHSTAPVVEE
Query Conservation                    
             
Alig confidence 































Template Conservation 
   
    




 






 


  

 
Template Sequence  ILMLVVFGLIFYFMILRPQQKRTKEHKKLMDS
Template Known Secondary structure  TTTGGG
Template Predicted Secondary structure 

Template SS confidence 































   24.....30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions