Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 52 Aligned Residues 217 % Identity 21% Template d1w07a3 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like acyl-CoA oxidase N-terminal domains Resolution 2.0

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L	G	A
Query Conservation
Alig confidence																							.	.	.																																																	.	.	.	.	.	.
Template Conservation																							.	.	.																																																	.	.	.	.	.	.
Template Sequence		W	A	G	S	R	H	A	F	E	V	S	D	R	I	A	R	L	V	A	S	D	.	.	.	P	V	F	E	K	S	N	R	A	R	L	S	R	K	E	L	F	K	S	T	L	R	K	C	A	H	A	F	K	R	I	I	E	L	R	L	N	E	E	E	A	G	R	L	R	H	F	I	.	.	.	.	.	.	D	Q
Template Known Secondary structure				S	S																T		.	.	.	G	G	G			T	T	T	T	S	S																							T	T														.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.																																																	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150						.	.	.	.	.
Predicted Secondary structure																																																													.	.										.	.	.	.	.
Query SS confidence																																																													.	.										.	.	.	.	.
Query Sequence		P	T	Y	V	L	Y	Q	L	P	G	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	.	.	R	R	N	G	K	I	Y	L	N	.	.	.	.	.	G	S	K	C	F
Query Conservation																																																													.	.										.	.	.	.	.
Alig confidence																																																													.	.										.	.	.	.	.
Template Conservation
Template Sequence		P	A	Y	V	D	L	H	W	G	M	F	V	P	A	I	K	G	Q	G	T	E	E	Q	Q	K	K	W	L	S	L	A	N	K	M	Q	I	I	G	C	Y	A	Q	T	E	L	G	H	G	S	N	V	Q	G	L	E	T	T	A	T	L	D	P	K	T	D	E	F	V	I	H	T	P	T	Q	T	A	S	K	W	W
Template Known Secondary structure											T									S														T	T	S	S								B	T	T	B	S	S		G	G	G									T	T	T	T								S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		156	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure							.																											.	.	.	.	.	.	.											.									.	.	.
Query SS confidence							.																											.	.	.	.	.	.	.											.									.	.	.
Query Sequence		I	T	S	S	A	.	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	.	.	.	.	.	.	.	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	.	.	.	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F
Query Conservation							.																											.	.	.	.	.	.	.											.									.	.	.
Alig confidence							.																											.	.	.	.	.	.	.											.									.	.	.
Template Conservation
Template Sequence		P	G	G	L	G	K	V	S	T	H	A	V	V	Y	A	R	L	I	T	N	G	K	D	Y	G	I	H	G	F	I	V	Q	L	R	S	L	E	D	H	S	P	L	P	N	I	T	V	G	D	I	G	T	K	M	G	N	G	A	Y	N	S	M	D	N	G	F	L	M	F	D	H	V	R	I	P	R	D	Q	M	L
Template Known Secondary structure			T	T	T	T	T	T		S											T	T													B		T	T	T			B		T	T										S	S	S	S	G	G	G	G	S								S	S					G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		224	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	R	L	S	K
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions