Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 48 Aligned Residues 222 % Identity 18% Template d1siqa2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		L	E	E	Q	L	T	T	D	E	I	L	I	R	D	T	F	R	T	Y	C	Q	E	R	.	L	M	P	R	I	L	L	A	N	R	N	E	V	F	H	R	E	I	I	S	E	M	G	E	L	G	V	L	G	P	T	I	K	G	Y	G	C	A	G	V	S	S	V	A	Y	G	L	L	A	R	E	L	E	R	V	D
Template Known Secondary structure		G	G	G	G	S																			.	T											T				T									T	T		S	S	T	T				T	T																		T	T
Template Predicted Secondary structure																									.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																																				.	.
Query SS confidence																	.																																																				.	.
Query Sequence		G	A	P	T	Y	V	L	Y	Q	L	P	G	G	F	N	.	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	.	.	I	Y	L	N	G	S	K	C	F	I	T
Query Conservation																	.																																																				.	.
Alig confidence																	.																																																				.	.
Template Conservation
Template Sequence		S	G	Y	R	S	A	M	S	V	Q	S	S	L	V	M	H	P	I	Y	A	Y	G	S	E	E	Q	R	Q	K	Y	L	P	Q	L	A	K	G	E	L	L	G	C	F	G	L	T	E	P	N	S	G	S	D	P	S	S	M	E	T	R	A	H	Y	N	S	S	N	K	S	Y	T	L	N	G	T	K	T	W	I	T
Template Known Secondary structure														T	T								S														T	T	S	S								B	T	T	B	S	S		G	G	G									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		S	S	A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G
Query Conservation																																									.
Alig confidence																.	.	.	.																						.
Template Conservation																.	.	.	.
Template Sequence		N	S	P	M	A	D	L	F	V	V	W	A	R	C	.	.	.	.	E	D	G	C	I	R	G	F	L	L	E	K	G	M	R	G	L	S	A	P	R	I	Q	G	K	F	S	L	R	A	S	A	T	G	M	I	I	M	D	G	V	E	V	P	E	E	N	V	L	P	G	A	S
Template Known Secondary structure		T	G	G	G		S									.	.	.	.	T	T	S									T	T		T	T					B					S	S	S	T	T	S														G	G	G	B		T	T
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions