Return to main results Retrieve Phyre Job Id

Job DescriptionP60584
Confidence100.00%DateThu Jan 5 12:06:55 GMT 2012
Rank41Aligned Residues224
% Identity25%Templated1rx0a2
SCOP infoAcyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains
Resolution1.77

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRL
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Template Sequence  PSMGLNEEQKEFQKVAFDFAARE. MAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATG
Template Known Secondary structure  TTTT

.TT


TT
SSTTS
GGGT




TT
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   15....20.........30....... ..40.........50.........60.........70.........80.........90...
 
   81........90..... ....100.........110.........120.........130.........140.........150.........
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Query Sequence  GAPTYVLYQLPGGFN. TFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSS
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Template Sequence  CTSTTAYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGA
Template Known Secondary structure 
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BTTBSSSGGG


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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   160.........170.........180.........190...... ...200.........210.........220......
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Query Sequence  AYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTK. LEKLGLRMDSCCEITFDDVELDEKDMFGRE
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Template Sequence  GESDIYVVMCRTG. GPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSE
Template Known Secondary structure  TT
SSS.SSSGGGTT
TT





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   174.....180...... ...190.........200.........210.........220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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