Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 49 Aligned Residues 202 % Identity 21% Template d1r2ja2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.10

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L	G	A	P	T	Y	V	L	Y	Q	L	P	G	G	F	N	.	T	F	L
Query Conservation																																																																														.
Alig confidence																																																																														.
Template Conservation
Template Sequence		L	L	T	D	L	V	G	D	R	A	A	E	W	D	T	S	G	E	L	P	R	D	L	L	V	R	L	G	A	D	G	L	L	C	A	E	V	A	A	E	H	G	G	L	G	L	G	S	R	E	N	G	E	F	T	A	H	V	G	S	L	C	S	S	L	R	S	V	M	T	S	Q	G	M	A	A	W	T	V	Q
Template Known Secondary structure								S	S									T													T	T	T	T	S	T	T	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y	L	N	G	S	K	C	F	I	T	S	S	A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P
Query Conservation
Alig confidence																						.	.																																																									.	.
Template Conservation																						.	.																																																									.	.
Template Sequence		R	L	G	D	A	G	Q	R	A	T	F	L	K	E	L	T	S	G	L	A	.	.	A	V	G	F	S	E	R	Q	A	G	S	D	L	S	A	M	R	T	R	V	R	L	D	G	D	T	A	V	V	D	G	H	K	V	W	T	T	A	A	A	Y	A	D	H	L	V	V	F	G	L	Q	E	D	G	S	G	.	.
Template Known Secondary structure				S												T	T					.	.						B	T	T	B	S	S		G	G	G									T	T												T	T	T	T	T		S							B		S	S	S			.	.
Template Predicted Secondary structure																						.	.																																																									.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G
Query Conservation																				.
Alig confidence		.	.																	.
Template Conservation		.	.
Template Sequence		.	.	A	V	V	V	V	P	A	D	T	P	G	V	R	V	E	R	V	P	K	P	S	G	C	R	A	A	G	H	A	D	L	H	L	D	Q	V	R	V	P	A	G	A	V	L	A	G	S	G
Template Known Secondary structure		.	.							T	T	S	T	T							S	S		S	S	S	T	T	S														G	G	G	B		T	T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions