Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 16 Aligned Residues 370 % Identity 24% Template c3sf6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of glutaryl-coa dehydrogenase from mycobacterium2 smegmatis Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		M	D	F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	.	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R
Query Conservation																																									.
Alig confidence																									.																.																			.
Template Conservation																									.																																			.
Template Sequence		I	N	A	V	L	S	A	E	E	R	E	I	R	D	T	V	R	S	V	V	Q	R	R	.	I	K	P	H	I	A	S	W	Y	E	D	G	E	L	P	A	R	E	L	A	V	E	L	G	E	L	G	L	L	G	M	H	L	K	.	G	Y	G	C	A	G	M	S	A	V	A	Y	G	L	A	C	L	E	L	E	A
Template Known Secondary structure			G	G	G	S																			.	T	T	T	T								T														T	T		S	S	T	T	S		.	S	T	T
Template Predicted Secondary structure																									.																																			.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		L	G	A	P	T	Y	V	L	Y	Q	L	P	G	.	.	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y	L	N	G	S	K	C	F	I	T
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		G	D	S	G	I	R	S	L	V	S	V	Q	G	S	L	A	M	Y	A	I	H	A	F	G	S	D	E	Q	K	D	Q	W	L	P	D	M	A	S	G	H	R	I	G	C	F	G	L	T	E	P	D	H	G	S	D	P	A	G	M	R	T	R	A	T	R	S	G	D	D	W	I	L	T	G	T	K	M	W	I	T
Template Known Secondary structure																T																							T	T	S	S								B	T	T	B	S	S		G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		S	S	A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K	E	E
Query Conservation																																									.
Alig confidence																		.	.	.	.	.																			.																																		.
Template Conservation																		.	.	.	.	.																																																					.
Template Sequence		N	G	S	V	A	D	V	A	V	V	W	A	R	T	D	E	.	.	.	.	.	G	I	R	G	F	V	V	P	T	D	T	P	G	F	T	A	N	T	I	K	S	K	M	S	L	R	A	S	V	T	S	E	L	V	L	D	G	V	R	L	P	D	S	A	R	L	P	G	A	T	S	L	.	G	A	P	L	R	C
Template Known Secondary structure		T	G	G	G		S									T	T	.	.	.	.	.									T	T	S	T	T								S		S	S		T	T	S														G	G	G	B		T	T			S	T	.
Template Predicted Secondary structure																		.	.	.	.	.																																																					.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	T	I	T	S	G	D	A	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	E	A	R	F	G	I	V	F	G	A	L	G	A	A	R	D	C	L	E	T	A	L	A	Y	A	C	S	R	E	Q	F	D	R	P	I	G	G	F	Q	L	T	Q	Q	K	L	A	D	M	T	L	E	Y	G	K	G	F	L	L	A	L	H	L	G	R	Q	K	D	A	G	E	L	A	P	E	Q	V	S	L
Template Known Secondary structure																																		T	T			G	G	G	S																															T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	L	N	N	V	R	E	A	I	E	I	A	R	T	A	R	T	V	L	G	A	S	G	I	T	G	E	Y	P	V	M	R	H	A	N	N	L	E	S	V	L	T	Y	E	G	T	S	E	M	H	T	L	I	I	G	Q	A	L	T	G	V
Template Known Secondary structure																						G	G	G	G	G	S	T	T	S	S														S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions