Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 26 Aligned Residues 366 % Identity 28% Template c3pfdB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of an acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to reduced flavin adenine dinucleotide solved3 by combined iodide ion sad mr Resolution 2.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L	G	A	P	T	Y	V	L
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		E	H	I	A	L	R	E	A	I	R	A	L	A	E	K	E	.	I	A	P	Y	A	A	E	V	D	E	K	A	R	F	P	E	E	A	L	A	A	L	N	S	S	G	F	S	A	I	H	V	P	E	E	Y	G	G	Q	G	A	D	S	V	A	T	C	I	V	I	E	E	V	A	R	V	D	C	S	A	S	L	I
Template Known Secondary structure																		.	T	G	G	G							T	T														T		S		T	T	S		G	G	G	T																		T	T
Template Predicted Secondary structure																		.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		88	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		Y	Q	L	P	G	G	F	N	.	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y	L	N	G	S	K	C	F	I	T	S	S	A	Y	T	P	Y	I	V
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		P	A	V	N	K	L	G	T	M	G	L	I	L	R	G	S	E	E	L	K	K	Q	V	L	P	A	V	A	S	G	E	A	M	A	S	Y	A	L	S	E	R	E	A	G	S	D	A	A	S	M	R	T	R	A	V	A	D	G	D	D	W	I	L	N	G	S	K	C	W	I	T	N	G	G	K	S	T	W	Y	T
Template Known Secondary structure								T	T																						T	S									B	T	T	B	S	S	S	G	G	G									T	T													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K	E	E	F	D	H	E	R	F	L	V	A
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		V	M	A	V	T	D	P	D	K	G	A	N	G	I	S	A	F	M	V	H	K	D	D	E	G	F	T	V	G	P	K	E	R	K	L	G	I	K	G	S	P	T	T	E	L	Y	F	E	N	C	R	I	P	G	D	R	I	I	G	E	P	G	T	G	F	K	T	A	L	A	T	L	D	H	T	R	P	T	I	G
Template Known Secondary structure						S		G	G	G	G	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S	S	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	T	I	T	S	G	D	A	A	M	C	K	Y	F	C	A	N	A	A
Query Conservation
Alig confidence																																																																.	.	.
Template Conservation																																																																.	.	.
Template Sequence		A	Q	A	V	G	I	A	Q	G	A	L	D	A	A	I	A	Y	T	K	E	R	K	Q	F	G	R	P	V	S	D	N	Q	G	V	Q	F	M	L	A	D	M	A	M	K	I	E	A	A	R	L	M	V	Y	S	A	A	A	R	A	E	R	G	.	.	.	G	F	I	S	A	A	S	K	C	F	A	S	D	V	A
Template Known Secondary structure																									T	T			G	G	G	S																																.	.	.
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	V	T	T	D	A	V	Q	L	F	G	G	Y	G	Y	T	Q	D	F	P	V	E	R	M	M	R	D	A	K	I	T	Q	I	Y	E	G	T	N	Q	I	Q	R	V	V	M	S	R	A	L	L	R
Template Known Secondary structure												T	G	G	G	G	G	S	T	T	S	S												T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions