Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 19 Aligned Residues 371 % Identity 26% Template c3oibB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L	G	A
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		I	W	T	T	A	E	R	E	A	L	R	K	T	V	R	A	F	A	E	R	E	.	V	L	P	H	A	H	E	W	E	R	A	G	E	I	P	R	E	L	H	R	K	A	A	E	L	G	L	L	G	A	G	F	P	E	D	A	G	G	S	G	G	D	G	A	D	P	V	V	I	C	E	E	M	H	Y	A	G	S
Template Known Secondary structure		T	T	S	S																		.	T	G	G	G								T	S												T	T		T	T	B	T	S		G	G	G	T			B			T													T	T
Template Predicted Secondary structure																							.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		83	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		P	T	Y	V	L	Y	Q	L	.	.	.	P	G	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y	L	N	G	S	K	C	F	I	T	S	S
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		P	G	G	V	Y	A	S	L	F	T	C	G	I	A	V	P	H	M	I	A	S	G	D	Q	R	L	I	D	T	Y	V	R	P	T	L	R	G	E	K	I	G	A	L	A	I	T	E	P	G	G	G	S	D	V	G	H	L	R	T	R	A	D	L	D	G	D	H	Y	V	I	N	G	A	K	T	Y	I	T	S	G
Template Known Secondary structure										S	T					S							T								T						T	T	S									B	T	T	B	S	S		G	G	G									T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K	E	E	F	D
Query Conservation																																							.
Alig confidence																.																							.
Template Conservation																.
Template Sequence		V	R	A	D	Y	V	V	T	A	A	R	T	G	G	.	P	G	A	G	G	V	S	L	I	V	V	D	K	G	T	P	G	F	E	V	T	R	K	L	D	K	M	G	W	R	S	S	D	T	A	E	L	S	Y	T	D	V	R	V	P	V	A	N	L	V	G	S	E	N	T	G	F	A	Q	I	A	A	A	F	V
Template Known Secondary structure		T	T		S									S	S	.	S	S	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S	S	T	T
Template Predicted Secondary structure																.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	T	I	T	S	G	D	.	A	A	M	C
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		A	E	R	V	G	L	A	T	Q	A	Y	A	G	A	Q	R	C	L	D	L	T	V	E	W	C	R	N	R	D	T	F	G	R	P	L	I	S	R	Q	A	V	Q	N	T	L	A	G	M	A	R	R	I	D	V	A	R	V	Y	T	R	H	V	V	E	R	Q	L	A	G	E	T	N	L	I	A	E	V	C	F	A
Template Known Secondary structure																																T	T			G	G	G	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	T	A	V	E	A	G	E	W	V	A	N	Q	A	V	Q	L	F	G	G	M	G	Y	M	A	E	S	E	V	E	R	Q	Y	R	D	M	R	I	L	G	I	G	G	G	T	T	E	I	L	T	S	L	A	A	K	T	L
Template Known Secondary structure																					G	G	G	G	G	S	T	T	S										T	T	T	T	T	T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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