Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 20 Aligned Residues 379 % Identity 28% Template c3mpjG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: structure of the glutaryl-coenzyme a dehydrogenase Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.
Predicted Secondary structure																																									.																																				.	.
Query SS confidence																																									.																																				.	.
Query Sequence		M	D	F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	.	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	.	.	M	E	L
Query Conservation																																									.																																				.	.
Alig confidence																									.																.																																				.	.
Template Conservation																									.
Template Sequence		M	D	F	N	L	S	K	E	L	Q	M	L	Q	K	E	V	R	N	F	V	N	K	K	.	I	V	P	F	A	D	Q	W	D	N	E	N	H	F	P	Y	E	E	A	V	R	P	M	G	E	L	G	F	F	G	T	V	I	P	E	E	Y	G	G	E	G	M	D	Q	G	W	L	A	A	M	I	V	T	E	E	I
Template Known Secondary structure																									.	T	T	T	T								T				T	T	T	T							T	T	T	T		T	T	S		G	G	G	T	S				T	T
Template Predicted Secondary structure																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		G	R	L	G	A	P	T	Y	V	L	Y	Q	L	P	.	.	G	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y	L	N	G	S	K	C	F
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		A	R	G	S	S	A	L	R	V	Q	L	N	M	E	V	L	G	C	A	Y	T	I	L	T	Y	G	S	E	A	L	K	K	K	Y	V	P	K	L	S	S	A	E	F	L	G	G	F	G	I	T	E	P	D	A	G	S	D	V	M	A	M	S	S	T	A	E	D	K	G	D	H	W	L	L	N	G	S	K	T	W
Template Known Secondary structure																T	T	T	T								S														T	T	S	S								B	T	T	B	S	S		G	G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		I	T	S	S	A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	.	D	M	S	K	P	G	I	K	V	T	K	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		I	S	N	A	A	Q	A	D	V	L	I	Y	Y	A	Y	T	D	K	A	A	G	S	R	G	L	S	A	F	V	I	E	P	R	N	F	P	G	I	K	T	S	N	L	E	K	L	G	S	H	A	S	P	T	G	E	L	F	L	D	N	V	K	V	P	K	E	N	I	L	G	K	P	G	D	G	A	R	I	V	F
Template Known Secondary structure				T	T	T	T		S	S							S		S	T	T	G	G	G	S								T	T	T	S	T	T									S	S		T	T	S														G	G	G			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		E	E	F	D	H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	.	T	I	T	S	G	D
Query Conservation																																																																											.
Alig confidence																																																																											.
Template Conservation
Template Sequence		G	S	L	N	H	T	R	L	S	A	A	A	G	G	V	G	L	A	Q	A	C	L	D	A	A	I	K	Y	C	N	E	R	R	Q	F	G	K	P	I	G	D	F	Q	M	N	Q	D	M	I	A	Q	M	A	V	E	V	E	A	A	R	L	L	A	Y	K	A	A	A	A	K	D	E	G	R	L	N	N	G	L	D
Template Known Secondary structure																																				T	T			G	G	G	S																														T	T		T	T	B
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	C	K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K	Q	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	M	A	K	Y	A	A	G	E	A	V	S	K	C	A	N	Y	A	M	R	I	L	G	A	Y	G	Y	S	T	E	Y	P	V	A	R	F	Y	R	D	A	P	T	Y	Y	M	V	E	G	S	A	N	I	C	K	M	I	I	A	L	D	Q	L	G	V	R	K
Template Known Secondary structure																									G	G	G	T	S		T	T	S	S								G	G	G	G	G	T	S	S	S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions