Phyre 2 alignment of P60584 with c3mkhC

Job Description P60584
Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012

Rank 24 Aligned Residues 377

% Identity 19% Template c3mkhC_

PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nitroalkane oxidase; PDBTitle: podospora anserina nitroalkane oxidase

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence	M	D	F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	.	.	.	.	.	.	.	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence																				.																		.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence	I	D	F	H	L	S	A	S	Q	K	G	T	Y	Q	A	A	R	S	L	.	A	R	N	L	L	M	P	A	R	Q	T	Y	L	Q	H	P	P	N	S	P	L	R	F	Q	S	T	Q	P	T	Y	A	A	A	V	S	A	G	I	L	K	G	Q	I	S	P	A	H	G	G	T	G	G	T	L	I	E	S	A	I	L
Template Known Secondary structure																				.				T									T	T	S		T	T		T					T	T										T	T	T	T	G	G	G	S		G	G	G	T
Template Predicted Secondary structure																				.
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																												.	.																	.	.	.	.	.
Query SS confidence																																												.	.																	.	.	.	.	.
Query Sequence	W	M	E	L	G	R	L	G	A	P	T	Y	V	L	Y	Q	L	P	G	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	.	.	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	.	.	.	.	.	V	G	S	L	K	T	T	Y	T	R	R	N	G	K
Query Conservation																																												.	.																	.	.	.	.	.
Alig confidence																																												.	.																	.	.	.	.	.
Template Conservation
Template Sequence	V	E	E	C	Y	S	V	E	P	S	A	A	L	T	I	F	A	T	G	L	G	L	T	P	I	N	L	A	A	G	P	Q	H	A	E	F	L	A	P	F	L	S	G	E	G	S	P	L	A	S	L	V	F	S	E	P	G	G	V	A	N	A	L	E	K	G	A	P	G	F	Q	T	T	A	R	L	E	G	D	E
Template Known Secondary structure						T	T																								G	G	G									S	S		S											T	T		S	T	T	T	T		T	T	S				S							T	T
Template Predicted Secondary structure
Template SS confidence
	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

	147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.							.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.											.	.	.	.	.	.														.	.	.	.	.	.										.
Query SS confidence																			.	.	.	.	.											.	.	.	.	.	.														.	.	.	.	.	.										.
Query Sequence	I	Y	L	N	G	S	K	C	F	I	T	S	S	A	Y	T	P	Y	.	.	.	.	.	I	V	V	M	A	R	D	G	A	S	.	.	.	.	.	.	P	D	K	P	V	Y	T	E	W	F	V	D	M	.	.	.	.	.	.	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C
Query Conservation																			.	.	.	.	.											.	.	.	.	.	.														.	.	.	.	.	.										.
Alig confidence																			.	.	.	.	.											.	.	.	.	.	.														.	.	.	.	.	.										.
Template Conservation
Template Sequence	W	V	I	N	G	E	K	M	W	A	T	N	C	A	G	W	D	F	K	G	C	D	L	A	C	V	V	C	R	D	A	T	T	P	L	E	E	G	Q	D	P	E	N	K	V	M	I	I	L	V	T	R	A	D	L	D	R	N	G	E	G	S	F	E	V	L	R	H	V	A	T	P	G	H	T	S	V	S	G	P
Template Known Secondary structure									S		T	T	T	T		T	T	S	S			S										S	S				T	T			G	G	G	G																T	T	S										S	S		T	T
Template Predicted Secondary structure
Template SS confidence
	162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

	209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K	E	E	F	D	H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	.	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence	H	V	R	Y	T	N	V	R	V	P	T	K	N	V	L	C	P	A	G	Q	G	A	K	V	A	F	G	A	F	D	G	S	A	V	L	V	G	A	M	G	V	G	L	M	R	A	A	F	D	A	A	L	K	F	A	K	E	D	N	R	G	G	A	V	P	L	L	E	R	Q	A	F	A	D	L	L	S	G	V	K
Template Known Secondary structure											G	G	G					T	T	S																																								S	S		S	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
	242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

	288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	T	I	T	S	G	D	A	.	.	.	.	A	M	C	K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.
Template Conservation
Template Sequence	I	Q	T	E	A	A	R	A	L	T	W	K	A	A	H	A	M	E	N	G	P	G	D	Y	D	A	R	R	E	L	A	L	A	A	K	V	F	C	S	E	A	A	V	K	A	C	T	D	V	I	N	A	V	G	I	S	A	Y	D	L	Q	R	P	F	S	D	L	L	N	T	A	V	V	L	P	I	F	D	G	G
Template Known Secondary structure																					S	S																																G	G	G	G	G	S	T	T	S	T									T					S	S	S
Template Predicted Secondary structure
Template SS confidence
	322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	D	E	M	Q	I	L	T	L	G	R	A	V	L	K	Q
Query Conservation	.
Alig confidence	.
Template Conservation
Template Sequence	N	V	G	I	R	R	R	H	L	Q	Q	L	M	L	K	P
Template Known Secondary structure	T	T	T	T											S	T
Template Predicted Secondary structure
Template SS confidence
	402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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