 |
Job Description | P60584 | Confidence | 18.97% | Date | Thu Jan 5 12:06:55 GMT 2012 |
Rank | 72 | Aligned Residues | 57 |
% Identity | 16% | Template | c3aqnA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:poly(a) polymerase; |
PDBTitle: complex structure of bacterial protein (apo form ii)
|
Resolution | 3.30 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | F | N | L | N | D | E | Q | E | L | F | V | A | G | I | R | E | L | M | A | S | E | N | W | E | A | Y | F | A | E | C | D | R | . |
. |
D | S | V | Y | P | E | R | F | V | K | A | L | A | D | M | G | I | D | S | L | L | I | P | E |
Query Conservation |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   | . | . |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |
|
|
|
Template Sequence |   |
G | M | R | I | S | P | E | T | A | E | P | I | P | R | L | A | T | L | L | N | D | I | P | P | A | H | L | F | E | E | S | L | K | L | L | Q | A | G | Y | G | Y | E | T | Y | K | L | L | C | E | Y | H | L | F | Q | P | L | F | P | T |
Template Known Secondary structure |   |
S |
|  |  |
|  |  |  |  | T |  |  |  |  |  | G | G | G | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|