Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 7 Aligned Residues 370 % Identity 27% Template c2z1qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl coa dehydrogenase Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	.	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L	G	A
Query Conservation																																				.
Alig confidence																							.													.
Template Conservation																							.
Template Sequence		D	F	D	E	S	V	K	E	I	A	R	T	T	R	T	F	V	E	R	E	V	.	L	P	L	L	E	R	M	E	H	G	E	L	E	L	N	V	P	L	M	R	K	A	G	E	L	G	L	L	A	I	D	V	P	E	E	Y	G	G	L	D	L	P	K	V	I	S	T	V	V	A	E	E	L	S	G	S	G	G
Template Known Secondary structure		G																		T	T	T	.									T	T		G	G	G											T	T	T	T	S	T	T	S		G	G	G	T																	T	T	S		T
Template Predicted Secondary structure																							.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																																																			.	.
Query SS confidence																.																																																			.	.
Query Sequence		P	T	Y	V	L	Y	Q	L	P	G	G	F	N	T	.	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	.	.	I	Y	L	N	G	S	K	C	F	I	T	S	S
Query Conservation																.																																																			.	.
Alig confidence																.																																																			.	.
Template Conservation
Template Sequence		F	S	V	T	Y	G	A	H	T	S	I	G	T	L	P	L	V	Y	F	G	T	E	E	Q	K	R	K	Y	L	P	K	L	A	S	G	E	W	I	A	A	Y	C	L	T	E	P	G	S	G	S	D	A	L	A	A	K	T	R	A	T	L	S	E	D	G	K	H	Y	I	L	N	G	V	K	Q	W	I	S	N	A
Template Known Secondary structure											T	T	T	T														T	T							T	S	S								B	T	T	B	S	S	S	G	G	G									T	T	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K	E	E	F	D
Query Conservation																																							.
Alig confidence																.	.	.	.																				.
Template Conservation																.	.	.	.
Template Sequence		G	F	A	H	L	F	T	V	F	A	K	V	D	G	.	.	.	.	E	H	F	T	A	F	L	V	E	R	D	T	P	G	L	S	F	G	P	E	E	K	K	M	G	I	K	A	S	S	T	R	Q	V	I	L	E	D	V	K	V	P	V	E	N	V	L	G	E	I	G	K	G	H	K	I	A	F	N	V	L	N
Template Known Secondary structure		T	T		S									T	T	.	.	.	.	T									T	T		T	T										S	S		T	T	S														G	G	G			S		T	T		T
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	R	Y	K	L	G	A	G	A	V	G	G	A	K	R	A	L	E	L	S	A	Q	Y	A	T	Q	R	V	Q	F	G	R	P	I	G	R	F	G	L	I	Q	Q	K	L	G	E	M	A	S	R	I	Y	A	A	E	S	A	V	Y	R	T	V	G	L	I	D	E	A	L	L	G	K	K	G	P	E	A	V	M
Template Known Secondary structure																														B		S	S	S	B	G	G	G	S																																	T	T			S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
					308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	T	I	T	S	G	D	A	A	M	C	K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K	Q
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	G	I	E	E	Y	A	V	E	A	S	I	I	K	V	L	G	S	E	V	L	D	Y	V	V	D	E	G	V	Q	I	H	G	G	Y	G	Y	S	Q	E	Y	P	I	E	R	A	Y	R	D	A	R	I	N	R	I	F	E	G	T	N	E	I	N	R	L	L	I	P	G	M	L	L	R	R
Template Known Secondary structure						T	T																											G	G	G	G	G	S	T	T	S										G	G	G	G	T	T	T	S									T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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