Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 29 Aligned Residues 369 % Identity 20% Template c2wbiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 11; PDBTitle: crystal structure of human acyl-coa dehydrogenase 11 Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.														.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																.																																																								.	.	.
Template Sequence		T	R	K	G	Q	E	V	L	I	K	V	K	H	F	.	M	K	Q	H	I	L	P	A	E	K	E	V	T	E	F	Y	V	Q	N	E	N	S	V	D	K	W	G	K	P	L	V	I	D	K	L	K	E	M	A	K	V	E	G	L	W	N	L	F	L	P	A	V	S	G	L	.	.	.	S	H	V	D	Y	A	L
Template Known Secondary structure																.				T																T	T		S	S			S															T	T		S		T	T								.	.	.
Template Predicted Secondary structure																.																																																								.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																																					.
Query SS confidence																						.	.	.																																					.
Query Sequence		V	W	M	E	L	G	R	L	G	A	P	T	Y	V	L	Y	Q	L	P	G	.	.	.	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	.	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y
Query Conservation																						.	.	.																																					.
Alig confidence																						.	.	.																																					.
Template Conservation
Template Sequence		I	A	E	E	T	G	K	C	F	F	A	P	D	V	F	N	C	Q	A	P	D	T	G	N	M	E	V	L	H	L	Y	G	S	E	E	Q	K	K	Q	W	L	E	P	L	L	Q	G	N	I	T	S	C	F	C	M	T	E	P	D	V	A	S	S	D	A	T	N	I	E	C	S	I	Q	R	D	E	D	S	Y	V
Template Known Secondary structure							T	T	S	T	T					T	T			T	T																				T							T	S	S									T	T	S		T	T	S	G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																		.									.	.	.
Query SS confidence																																																		.									.	.	.
Query Sequence		L	N	G	S	K	C	F	I	T	S	S	A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	.	.	.	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G
Query Conservation																																																		.									.	.	.
Alig confidence																															.																			.									.	.	.
Template Conservation																															.
Template Sequence		I	N	G	K	K	W	W	S	S	G	A	G	N	P	K	C	K	I	A	I	V	L	G	R	T	Q	N	T	S	.	Q	H	S	M	I	L	V	P	M	N	T	P	G	V	K	I	I	R	P	L	S	V	F	G	Y	T	D	N	F	H	G	G	H	F	E	I	H	F	N	Q	V	R	V	P	A	T	N	L	I	L
Template Known Secondary structure											T	T	T	S	T	T															.									T	T	S	T	T									B	T	T	B			G	G	G															G	G	G	B		S
Template Predicted Secondary structure																															.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	N	G	F	N	R	V	K	E	E	F	D	H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	G	R	G	F	E	I	S	Q	G	R	L	G	P	G	R	I	H	H	C	M	R	T	V	G	L	A	E	R	A	L	Q	I	M	C	E	R	A	T	Q	R	I	A	F	K	K	K	L	Y	A	H	E	V	V	A	H	W	I	A	E	S	R	I	A	I	E	K	I	R	L	L	T	L	K	A	A	H	S	M
Template Known Secondary structure			T	T																																										T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		305	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		D	N	.	.	G	T	I	T	S	G	D	A	A	M	C	K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K	Q	Y
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		D	T	L	G	S	A	G	A	K	K	E	I	A	M	I	K	V	A	A	P	R	A	V	S	K	I	V	D	W	A	I	Q	V	C	G	G	A	G	V	S	Q	D	Y	P	L	A	N	M	Y	A	I	T	R	V	L	R	L	A	D	G	P	D	E	V	H	L	S	A	I	A	T	M	E	L	R	D	Q
Template Known Secondary structure									T																										T	G	G	G	G	G	S	T	T	S	S												T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions