Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 5 Aligned Residues 370 % Identity 25% Template c2ix5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal; PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa Resolution 2.7 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L	G
Query Conservation
Alig confidence																								.																																		.
Template Conservation																								.																																		.
Template Sequence		N	D	L	L	T	P	E	E	Q	A	I	R	K	K	V	R	E	C	M	E	K	E	.	V	A	P	I	M	T	E	Y	W	E	K	A	E	F	P	F	H	I	T	P	K	L	G	A	M	G	V	A	G	G	S	I	K	.	G	Y	G	C	P	G	L	S	I	T	A	N	A	I	A	T	A	E	I	A	R	V	D
Template Known Secondary structure		G	G	G	S																			.	T											T				G	G	G						T	T	T		T	T	T	T			.	S	T	T
Template Predicted Secondary structure																								.																																		.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	P	T	Y	V	L	Y	Q	L	P	G	.	.	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y	L	N	G	S	K	C	F	I	T	S	S
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		A	S	C	S	T	F	I	L	V	H	S	S	L	G	M	L	T	I	A	L	C	G	S	E	A	Q	K	E	K	Y	L	P	S	L	A	Q	L	N	T	V	A	C	W	A	L	T	E	P	D	N	G	S	D	A	S	G	L	G	T	T	A	T	K	V	E	G	G	W	K	I	N	G	Q	K	R	W	I	G	N	S
Template Known Secondary structure													T	T									S														T	T	S	S								B	T	T	B	S	S		G	G	G									T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K	E	E	F	D
Query Conservation																																							.
Alig confidence																			.	.	.																		.																																		.
Template Conservation																			.	.	.																																																				.
Template Sequence		T	F	A	D	L	L	I	I	F	A	R	N	T	T	T	N	Q	.	.	.	I	N	G	F	I	V	K	K	D	A	P	G	L	K	A	T	K	I	P	N	K	I	G	L	R	M	V	Q	N	G	D	I	L	L	Q	N	V	F	V	P	D	E	D	R	L	P	G	V	N	S	F	.	Q	D	T	S	K	V	L	A
Template Known Secondary structure		T	T		S									T	T	T	S	S	.	.	.								T	T		T	T										S	S	S	T	T	S														G	G	G	B		T	T		S	S		.
Template Predicted Secondary structure																			.	.	.																																																				.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	T	I	T	S	G	D	A	A	M	C	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	R	V	M	V	A	W	Q	P	I	G	I	S	M	G	I	Y	D	M	C	H	R	Y	L	K	E	R	K	Q	F	G	A	P	L	A	A	F	Q	L	N	Q	Q	K	L	V	Q	M	L	G	N	V	Q	A	M	F	L	M	G	W	R	L	C	K	L	Y	E	T	G	Q	M	T	P	G	Q	A	S	L	G	K
Template Known Secondary structure																																T	T			G	G	G	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	I	S	S	K	A	R	E	T	A	S	L	G	R	E	L	L	G	G	N	G	I	L	A	D	F	L	V	A	K	A	F	C	D	L	E	P	I	Y	T	Y	E	G	T	Y	D	I	N	T	L	V	T	G	R	E	V	T	G
Template Known Secondary structure																			T	G	G	G	G	G		G	G	G	S														S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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