Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 23 Aligned Residues 367 % Identity 22% Template c2ebaI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase; PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus Resolution 2.21 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	F	V	T	L	A	A	V	W	M	E	L	G	R	L
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		L	E	D	L	L	T	P	E	E	K	E	V	Q	K	A	A	R	R	F	.	L	E	K	E	A	L	P	H	I	R	D	W	W	E	E	G	V	F	P	T	H	L	I	P	R	F	A	E	L	G	F	L	G	P	T	L	P	P	E	Y	G	G	A	G	V	S	S	A	A	Y	G	L	I	C	Y	E	L	E	R	V
Template Known Secondary structure		G	G	G	G	S															.					T										T	T				T	T									T		S	S	T	T	S		G	G	G	T
Template Predicted Secondary structure																					.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		G	A	P	T	Y	V	L	Y	Q	L	P	.	.	G	G	F	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	I	Y	L	N	G	S	K	C	F	I	T	S
Query Conservation													.	.
Alig confidence													.	.																																																.
Template Conservation																																																														.
Template Sequence		D	S	G	L	R	S	F	V	S	V	Q	S	S	L	V	M	Y	P	I	Y	A	Y	G	S	E	E	Q	K	R	E	F	L	P	K	L	A	R	G	E	M	V	G	C	F	G	L	T	E	P	D	G	G	S	D	P	Y	G	N	M	K	.	T	R	A	R	R	D	T	W	V	L	N	G	T	K	M	W	I	T	N
Template Known Secondary structure															T	T																						T	T	S	S									T	T		T	T	S	T	T	T	T			.																			T
Template Predicted Secondary structure																																																														.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		S	A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V	K	E	E	F
Query Conservation																																								.
Alig confidence															.	.	.	.	.	.	.																			.																												.
Template Conservation															.	.	.	.	.	.	.																																															.
Template Sequence		G	N	L	A	H	L	A	V	I	W	A	K	D	.	.	.	.	.	.	.	E	V	L	G	F	L	V	P	T	D	T	P	G	F	Q	A	R	E	V	K	R	K	M	S	L	R	A	S	V	T	S	E	L	V	L	E	E	V	R	V	P	E	S	L	R	L	.	P	K	A	L	G	L	K	A	P	L	S	C	L
Template Known Secondary structure		T	T	T		S									.	.	.	.	.	.	.									T	T	S	T	T								S		S	S	S		S	S														G	G	G			.					S	T
Template Predicted Secondary structure															.	.	.	.	.	.	.																																															.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	T	I	T	S	G	D	A	A	M	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	A	R	F	G	I	A	W	G	A	M	G	A	L	E	A	V	Y	E	E	A	V	A	F	A	K	S	R	S	T	F	G	E	P	L	A	K	K	Q	L	V	Q	A	K	L	A	E	M	L	A	W	H	T	E	G	L	L	L	A	W	R	L	A	R	L	K	D	E	G	K	L	T	P	A	Q	V	S	L	A
Template Known Secondary structure																															B	S	S	S	S	B	G	G	G	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	Q	N	V	W	K	A	L	Q	A	A	R	M	A	R	D	I	L	G	G	S	G	I	T	L	E	Y	H	A	I	R	H	M	L	N	L	E	T	V	Y	T	Y	E	G	T	H	D	V	H	T	L	V	L	G	R	E	I	T	G
Template Known Secondary structure																					G	G	G	G	G	S	T	T	S	S												T	T	S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions