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Job DescriptionP60584
Confidence100.00%DateThu Jan 5 12:06:55 GMT 2012
Rank4Aligned Residues377
% Identity29%Templatec2cx9C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRL
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Template Sequence  LWFEEGAEERQVLGPFREFLKAE. VAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYY
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   3......10.........20..... ....30.........40.........50.........60.........70.........80.
 
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Query Sequence  GAPTYVLYQLPG. . GFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITS
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Template Sequence  DGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQ
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
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Query Sequence  SAYTPYIVVMARDGASPDKPV. . . . YTEWFVDMSKPGIKVTK. LEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRV
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Template Sequence  GSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDV
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  KEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGD
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Template Sequence  LRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLE
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   314.....320.........330.........340.........350.........360.........370........
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Query Sequence  AAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQ
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Template Sequence  AAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA
Template Known Secondary structure  TGGGGGSTTSTGGGTTTS
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   322.......330.........340.........350.........360.........370.........380......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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