Job Description P60584 Confidence 100.00% Date Thu Jan 5 12:06:55 GMT 2012 Rank 15 Aligned Residues 376 % Identity 30% Template c1bucB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:butyryl-coa dehydrogenase; PDBTitle: three-dimensional structure of butyryl-coa dehydrogenase from2 megasphaera elsdenii Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		M	D	F	N	L	N	D	E	Q	E	L	F	V	A	G	I	R	E	L	M	A	S	E	N	W	E	A	Y	F	A	E	C	D	R	D	S	V	Y	P	E	R	F	V	K	A	L	A	D	M	G	I	D	S	L	L	I	P	E	E	H	G	G	L	D	A	G	.	.	.	F	V	T	L	A	A	V	W	M	E	L
Query Conservation																																																																				.	.	.
Alig confidence																					.																																															.	.	.
Template Conservation																					.
Template Sequence		M	D	F	N	L	T	D	I	Q	Q	D	F	L	K	L	A	H	D	F	.	G	E	K	K	L	A	P	T	V	T	E	R	D	H	K	G	I	Y	D	K	E	L	I	D	E	L	L	S	L	G	I	T	G	A	Y	F	E	E	K	Y	G	G	S	G	D	D	G	G	D	V	L	S	Y	I	L	A	V	E	E	L
Template Known Secondary structure																					.				T												T													T	S	G	G	G	T	T	S		G	G	G	T		S	G	G	G	T
Template Predicted Secondary structure																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.
Predicted Secondary structure																			.	.																																																					.
Query SS confidence																			.	.																																																					.
Query Sequence		G	R	L	G	A	P	T	Y	V	L	Y	Q	L	P	G	G	F	.	.	N	T	F	L	R	E	G	T	Q	E	Q	I	D	K	I	M	A	F	R	G	T	G	K	Q	M	W	N	S	A	I	T	E	P	G	A	G	S	D	V	G	S	L	K	T	T	Y	T	R	R	N	G	K	.	I	Y	L	N	G	S	K	C
Query Conservation																			.	.																																																					.
Alig confidence																			.	.																																																					.
Template Conservation
Template Sequence		A	K	Y	D	A	G	V	A	I	T	L	S	A	T	V	S	L	C	A	N	P	I	W	Q	F	G	T	E	A	Q	K	E	K	F	L	V	P	L	V	E	G	T	K	L	G	A	F	G	L	T	E	P	N	A	G	T	D	A	S	G	Q	Q	T	I	A	T	K	N	D	D	G	T	Y	T	L	N	G	S	K	I
Template Known Secondary structure																			T																							T	S	S								B	T	T	B	S	S	S	T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		F	I	T	S	S	A	Y	T	P	Y	I	V	V	M	A	R	D	G	A	S	P	D	K	P	V	Y	T	E	W	F	V	D	M	S	K	P	G	I	K	V	T	K	.	L	E	K	L	G	L	R	M	D	S	C	C	E	I	T	F	D	D	V	E	L	D	E	K	D	M	F	G	R	E	G	N	G	F	N	R	V
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		F	I	T	N	G	G	A	A	D	I	Y	I	V	F	A	M	T	D	K	S	K	G	N	H	G	I	T	A	F	I	L	E	D	G	T	P	G	F	T	Y	G	K	K	E	D	K	M	G	I	H	T	S	Q	T	M	E	L	V	F	Q	D	V	K	V	P	A	E	N	M	L	G	E	E	G	K	G	F	K	I	A
Template Known Secondary structure					T	T	T	T		S								S		S	S	S	S	T	T									T	T		T	T										S	S		T	T	S														G	G	G			S		T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	E	F	D	H	E	R	F	L	V	A	L	T	N	Y	G	T	A	M	C	A	F	E	D	A	A	R	Y	A	N	Q	R	V	Q	F	G	E	A	I	G	R	F	Q	L	I	Q	E	K	F	A	H	M	A	I	K	L	N	S	M	K	N	M	L	Y	E	A	A	W	K	A	D	N	G	T	I	T	S	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	M	T	L	D	G	G	R	I	G	V	A	A	Q	A	L	G	I	A	E	A	A	L	A	D	A	V	E	Y	S	K	Q	R	V	Q	F	G	K	P	L	C	K	F	Q	S	I	S	F	K	L	A	D	M	K	M	Q	I	E	A	A	R	N	L	V	Y	K	A	A	C	K	K	Q	E	G	K	P	F	T	V	D
Template Known Secondary structure																																					T	T			G	G	G	S																															T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	C	K	Y	F	C	A	N	A	A	F	E	V	V	D	S	A	M	Q	V	L	G	G	V	G	I	A	G	N	H	R	I	S	R	F	W	R	D	L	R	V	D	R	V	S	G	G	S	D	E	M	Q	I	L	T	L	G	R	A	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	I	A	K	R	V	A	S	D	V	A	M	R	V	T	T	E	A	V	Q	I	F	G	G	Y	G	Y	S	E	E	Y	P	V	A	R	H	M	R	D	A	K	I	T	Q	I	Y	E	G	T	N	E	V	Q	L	M	V	T	G	G	A	L	L	R
Template Known Secondary structure																								T	G	G	G	G	G	S	T	T	S										G	G	G	G	T	S	S	S														T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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