Job Description P23325 Confidence 9.02% Date Thu Jan 5 11:39:22 GMT 2012 Rank 74 Aligned Residues 89 % Identity 21% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.								.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.																															.
Query SS confidence																													.	.	.	.	.	.	.																															.
Query Sequence		L	A	I	N	Y	G	N	A	D	I	V	E	T	I	F	N	S	L	S	E	T	G	Y	E	G	L	L	.	.	.	.	.	.	.	S	K	K	N	L	M	H	I	L	E	A	K	D	K	N	G	F	S	G	L	F	L	A	I	S	R	K	D	K	N	.	V	V	T	S	I	L	N	A	L	P	K	L	A	A	T
Query Conservation																													.	.	.	.	.	.	.																															.
Alig confidence																													.	.	.	.	.	.	.																															.														.	.
Template Conservation																																																																																.	.
Template Sequence		E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	H	S	F	D	K	L	S	F	L	Y	L	V	T	G	D	V	N	K	L	S	K	M	Q	N	I	A	Q	T	R	E	D	F	G	S	M	L	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A	E	G	G	S	L	P	L	.	.
Template Known Secondary structure						T	T												T	T													T															T	T													T												T	T					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	L	D	N	E	Q	V	Y	K	F	L	S	A	K	N	R	T	S	S	H	V	L	Y	H	V	M	A	N	G	D	A	D	M	L	K	I	V	L	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	A	V	A	K	A	N	G	D	E	A	A	A	S	A	F	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							762	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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