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Job Description | P23325 | Confidence | 9.02% | Date | Thu Jan 5 11:39:22 GMT 2012 |
Rank | 74 | Aligned Residues | 89 |
% Identity | 21% | Template | c3mkqB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:coatomer subunit alpha; |
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
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Resolution | 2.50 Å |
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388 | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | A | I | N | Y | G | N | A | D | I | V | E | T | I | F | N | S | L | S | E | T | G | Y | E | G | L | L | . |
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S | K | K | N | L | M | H | I | L | E | A | K | D | K | N | G | F | S | G | L | F | L | A | I | S | R | K | D | K | N | . |
V | V | T | S | I | L | N | A | L | P | K | L | A | A | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | A | L | A | Q | G | N | A | S | L | A | E | M | I | Y | Q | T | Q | H | S | F | D | K | L | S | F | L | Y | L | V | T | G | D | V | N | K | L | S | K | M | Q | N | I | A | Q | T | R | E | D | F | G | S | M | L | L | N | T | F | Y | N | N | S | T | K | E | R | S | S | I | F | A | E | G | G | S | L | P | L | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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684 | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | |
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460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | H | L | D | N | E | Q | V | Y | K | F | L | S | A | K | N | R | T | S | S | H | V | L | Y | H | V | M | A | N | G | D | A | D | M | L | K | I | V | L | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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A | Y | A | V | A | K | A | N | G | D | E | A | A | A | S | A | F | L | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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762 | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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