Job Description P23325 Confidence 100.00% Date Thu Jan 5 11:39:22 GMT 2012 Rank 7 Aligned Residues 264 % Identity 14% Template c3ljnA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: ankyrin repeat protein from leishmania major Resolution 2.90 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	I	N	L	P	G	L	Y	L	A	I	N	Y	G	N	A	D	I	V	E	T	I	F	N	S	L	S	E	T	G	Y	E	G	L	L	S	K	K	N	L	M	H	I	L	E	A	K	D	K	N	G	F	S	G	L	F	L	A	I	S	R	K	D	K	N	V	V	T	S	I	L	N	A	L	P	K	L	A	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		D	D	E	N	X	E	K	I	H	V	A	A	R	K	G	Q	T	D	E	V	R	R	L	I	E	T	G	V	S	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	N	R	F	G	C	T	A	L	H	L	A	C	K	F	G	C	V	D	T	A	K	Y	L	A	S	V	G	E	V	H	S	.
Template Known Secondary structure																T											T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T																													.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	H	L	D	N	E	Q	V	Y	K	F	L	S	A	K	N	R	T	S	S	H	V	L	Y	H	V	M	A	N	G	D	A	D	M	L	K	I	V	L	N	A	L	P	L	L	I	R	T	C	H	L	T	K	E	Q	V	L	D	L	L	K	A	K	D	F	Y	G	C	P	G	L	Y	L	A	M	Q	N	G	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	W	H	G	Q	K	P	I	H	L	A	V	X	A	N	K	T	D	L	V	V	A	L	V	E	G	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	Q	X	P	E	S	L	L	N	E	C	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	T	T	B									T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																						.	.	.	.	110	.	.	.	.	.	.	.	.	.
		539	540	.	.	.	.	.	.	.						.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.										.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		S	D	I	V	K	V	I	L	E	.	.	.	.	.	A	L	P	S	L	A	Q	E	I	N	I	S	A	S	D	I	V	D	L	L	.	.	.	.	.	.	.	.	.	T	A	K	S	L	A	R	D	T	G	L	F	M	A	M	Q	R	G	H	M	N	V	I	N	T	I	F	N	A	L	P	T	L	F	N	T	F
Query Conservation											.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	V	N	E	I	G	S	H	V	K	H	C	K	G	Q	T	A	L	H	W	C	V	G	L	G	P	E	Y	L	E	X	I	K	I	L	V	Q	L	G	A	S	P	T	A	K	D	K	A	D	E	T	P	L	X	R	A	X	E	F	R	N	R	E	A	L	D	L	X	X	D	T	V	P	S	K	S	S	L	R
Template Known Secondary structure								T	T						S											S		G	G	G											T			T	T				T	T	S										T	T													S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	D	K	K	N	M	K	P	L	L	L	A	N	N	S	N	E	Y	P	G	L	F	S	A	I	Q	H	K	Q	Q	N	V	V	E	T	V	Y	L	A	L	S	D	H	A	R	L	F	G	F	T	A	E	D	I	M	D	F	W	Q	H	K	A	P	Q	K	Y	S	A	F	E	L	A	F	E	F	G	H	R	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	Y	A	.	.	.	.	.	.	.	.	.	.	N	K	Q	G	N	S	H	L	H	W	A	I	L	I	N	W	E	D	V	A	X	R	F	V	E	X	G	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	X	E	D	N	E	H	T	V	P	L	Y	L	S	V	R	A	A	X	V	L
Template Known Secondary structure		T	T			.	.	.	.	.	.	.	.	.	.		T	T				T	T					T	T	T										T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				T	T	S										T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.																.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		685	.	.	.	.	690	.	.	.	.	.	.	.	.														.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	E	L	I	L	N	T	L	N	K	M	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	G	F	T	D	N	P	R	Y	I	A	E	K	N	Y	M	E	A	L	L	K
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	K	E	L	L	Q	K	T	D	V	F	L	I	Q	A	C	P	Y	H	N	G	T	T	V	L	P	D	R	V	V	W	L	D	F	V	P	A	A	A	D	P	S	K	Q	E	V	L	Q
Template Known Secondary structure										S							T		T	T	B	S	S	S	S	B		G	G	G					T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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