Job Description P23325 Confidence 100.00% Date Thu Jan 5 11:39:22 GMT 2012 Rank 2 Aligned Residues 245 % Identity 20% Template c3keaB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:k1l; PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function Resolution 2.30 Å

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	Y	N	S	I	N	L	P	G	L	Y	L	A	I	N	Y	G	N	A	D	I	V	E	T	I	F	N	S	L	S	E	T	G	Y	E	G	L	L	S	K	K	N	L	M	H	I	L	E	A	K	D	K	N	G	F	S	G	L	F	L	A	I	S	R	K	D	K	N	V	V	T	S	I	L	N	A	L	P
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	K	A	D	V	H	G	H	S	A	S	Y	Y	A	I	A	D	N	N	V	R	L	V	C	T	L	L	N	A	G	A	L	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	N	E	F	P	L	H	Q	A	A	T	L	E	D	T	K	I	V	K	I	L	L	F	S	G	L
Template Known Secondary structure		T	T				T	T	S										T	T											T	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T								T	T	S	S	S										T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		K	L	A	A	T	H	H	L	D	N	E	Q	V	Y	K	F	L	S	A	K	N	R	T	S	S	H	V	L	Y	H	V	M	A	N	G	D	A	D	M	L	K	I	V	L	N	A	L	P	L	L	I	R	T	C	H	L	T	K	E	Q	V	L	D	L	L	K	A	K	D	F	Y	G	.	C	P	G	L	Y	L	A
Query Conservation																																																																										.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	F	D	D	K	G	N	T	A	L	Y	Y	A	V	D	S	G	N	X	Q	T	V	K	L	F	V	K	K	N	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	X	F	Y	G	K	T	G	W	K	T	S	F	Y	H	A
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	S											T													G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S	S	S	G	G	G	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.																.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	N	G	H	S	D	I	V	K	V	I	L	E	A	L	P	S	L	A	Q	E	I	N	I	S	A	S	D	I	V	D	L	L	T	A	K	S	L	A	R	D	T	G	L	F	M	A	M	Q	R	G	H	M	N	V	I	N	T	I	F	N	A	L	P	T	L	F	N	T	F	K	F	D	K	K	N	M	K	P
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	X	L	N	D	V	S	I	V	S	Y	F	L	S	E	I	P	S	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	A	I	L	L	S	C	I	H	I	T	I	K	N	G	H	V	D	X	X	I	L	L	L	D	Y	X	T	S	T	N	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T										T	T	S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T											T	T															T		T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		614	.	.	.	.	.	620	.	.	.	.	.		.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	L	L	A	N	N	S	N	E	Y	P	G	.	L	F	S	A	I	Q	H	K	Q	Q	N	V	V	E	T	V	Y	L	A	L	S	D	H	A	R	L	F	G	F	T	A	E	D	I	M	D	F	W	Q	H	K	A	P	Q	K	Y	S	A	F	E	L	A	F	E	F	G	H	R	V	I	A	E	L	I	L	N	T
Query Conservation														.
Alig confidence		.	.	.	.									.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	N	N	S	L	L	F	I	P	D	I	K	L	A	I	D	N	K	D	I	E	X	L	Q	A	L	F	K	Y	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	Y	S	A	N	L	E	N	V	L	L	D	D	A	E	I	A	K	X	I	I	E	K
Template Known Secondary structure		.	.	.	.	T				B			T	T								T									T	T	S		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	T	T		G	G	G	T	T	T
Template Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	M	A	E	S	F	G	F	T	D	N	P	R	Y	I	A	E	K	N	Y	M	E	A	L	L	K	K
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		H	V	E	Y	K	S	D	S	Y	T	K	.	.	D	L	D	I	V	K	N	N	K	L	D	E	I	I	S	K
Template Known Secondary structure									T	T	T	T	.	.	T						T		S
Template Predicted Secondary structure													.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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